Syngnathus scovelli (Gulf pipefish): 125985750
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Entry
125985750 CDS
T08785
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03030
DNA replication
sscv03410
Base excision repair
sscv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125985750 (fen1)
03410 Base excision repair
125985750 (fen1)
03450 Non-homologous end-joining
125985750 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sscv03032
]
125985750 (fen1)
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125985750 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125985750 (fen1)
DNA replication proteins [BR:
sscv03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
125985750 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
125985750 (fen1)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
125985750 (fen1)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125985750 (fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
DUF7645
Motif
Other DBs
NCBI-GeneID:
125985750
NCBI-ProteinID:
XP_049604771
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All DBs
Position
18:11529620..11532346
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AA seq
380 aa
AA seq
DB search
MGIHGLAKLIADLAPRAIREQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSGELEKRVERRAEAEKMLAQAQELGEQ
ENIDKLTKRLVKVTKQHNDECKKLLSLMGVPYIEAPCEAEASCAALVKAGKVFATATEDM
DGLTFGTNVLLRHLTASEAKKLPVQEFSFSRILEDINLTTEQFIDLCILLGCDYCGTIKG
IGPKRAIDLIKQHGSIEEILKNIDSNKHPAPEDWLYKEARELFLKPQVVDCSQVELKWSE
PDEDGLLHFMCEEKQFSEDRIRNGCKKIAKSRQGSTQGRLDSFFSVTGSLSSKRKEPEVK
GSAKKKMKTGATPGKFKKGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggtatacatggacttgccaagctcattgctgacctggctccgagggccataagagag
caagacatcaagaactactttggccgaaaaattgctatagatgcttccatgtgcatctac
cagttcctgattgctgtgcgacaggatggcaacgtactgcagaatgaggatggggagaca
actagccacctgatgggaatgttctacaggaccatccgcatgttggaacatggcattaag
cccgtttatgtgtttgatggcaagcccccgcagctcaagtccggagagctggaaaagaga
gtggagagaagagcagaagctgagaaaatgcttgcacaagcccaggaacttggggaacaa
gaaaacatcgacaaactcacaaagcgcctggtcaaagtcaccaagcaacacaatgatgag
tgtaagaagctgctgtccctcatgggagttccttacattgaggcgccgtgtgaggcggag
gccagctgtgccgctctggtcaaagcagggaaggtctttgccacagccacggaggatatg
gacggcttgacattcggaaccaacgtcctgctaagacacctcacagccagcgaagcaaag
aagcttccagtccaagagttctccttcagtcgcattcttgaggacataaacttgaccact
gaacagttcatagacttgtgcattctgctgggatgcgactactgcggcaccatcaagggg
atcggtcccaagcgagccatcgacctgatcaagcagcacggcagcatcgaggagatcctc
aaaaacattgactcaaataagcacccggctccagaggactggttatacaaggaggccaga
gagctgtttctgaaaccccaagtggtggattgttcccaagtggagctgaagtggagcgag
ccggacgaggacgggctcctgcatttcatgtgtgaagaaaaacagttcagcgaggacagg
atccgcaacggctgtaagaagattgcaaagagtcgccaggggagcacgcagggacgacta
gactccttcttctccgtcactggctcgctgtcgtccaaacggaaggagcctgaagtcaaa
ggctctgcgaaaaagaagatgaagactggagccacaccaggaaaattcaaaaaaggaaaa
tga
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