Syngnathus scovelli (Gulf pipefish): 125985780 Help Entry 125985780         CDS       T08785                                  Name (RefSeq) laminin subunit alpha-1   KO K05637   laminin, alpha 1/2 Organism sscv  Syngnathus scovelli (Gulf pipefish) Pathway sscv04510   Focal adhesion sscv04512   ECM-receptor interaction sscv04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sscv00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     125985780  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     125985780   09142 Cell motility    04820 Cytoskeleton in muscle cells     125985780 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Laminin_G_1 Laminin_EGF Laminin_G_2 Laminin_B Laminin_N Laminin_II Laminin_G_3 Laminin_I JAG1-like_EGF2 AATF-Che1 Motif Other DBs NCBI-GeneID:  125985780 NCBI-ProteinID:  XP_049604838 LinkDB All DBs Position Unknown AA seq 3095 aa AA seqDB search MKSHWDAAQSPQQHILEAGPAGAHSTLTLTQVGVTFPMNLLVLMLLMQQTASQQRGLFPA ILNLATNAKISSNATCGEPRAEVYCKLVEHVPGRLIKNPHCPKCDGNSLLLGERHPITNA IDGTNRWWQSPSIKNGRQFHWVTITLDLKQVFQVAYIIIKAANSPRPGNWILERSVDGVT FEPWQFYAISDSECLSRYNVAPRLGAPTYKGDTEVICTSYYSRLEPLEHGEIHTSLINSR PGADDLTSELLNFTSARFIRLRFQRIRTLNADLMTLSVHDPRDVDPIVTRRYYYSIKDIS VGGMCICYGHARSCPLDPVTKKLQCVCEHNTCGVSCDHCCPGYHQQPWQPGTISVGNTCE KCNCHNKASDCVYNQTVADLGLSVDMGGVRRGGGVCVECRQNTAGVNCETCAERYYRPER VSPYSEWPCLECDCDPRGARSSICTRDGASAGQCACKEGFAGRRCDHCAFGFRDFPLCTR CECNTAGSVNGDPCDDDCVCKANVAGLHCDLCKSGFYNLQAANPLGCTDCFCFGVSDVCE SSTWMAAQVVSAGAWLHPSSSVHTNLTHQLPASGDLSSSHGQPQELQWEAPDSFLGNKLS SYGGLLNYSVAYGGSLDNNFVPASTDVIVQGNGRALRLSSPRVLVLSPSAKRSVAVHMLP DQFVDQQSGDPVSRDDLLSVLAEVTSLRVRVHLNASAGGDVRLVSASLDVADSRSVSGVR AVAVETCECPWGYSGTSCESCLPGFYRVAGVLFGGNCMPCECNDHASDCDFAGVCLGCRH HTTGPHCDQCLPGFYGDATEGTADDCRRCACPLTEASNSFSLTCSLDAFGLVKCDQCQEG YTGSTCHKCSDGFYGNPQVVGGSCVRCQCNDNVDTEEAGHCDAVNGECLRCRNNTAGRHC EVCAEGFYGDAVHRKNCRECACHVVGSLSSVCDVASGQCQCRDNATGRACDRCQPGFFAS QDGQGCLACGCDPRGSLEESCDADGRCQCTLGVDGDKCDRCSRGYFDFHANGCKACNCKH TGGNCHHQTGECICPPHTEGDTCDTCEAGYWGHHPITGCKLCNCSPEGSSASQCNLTDGQ CLCRVGFSGRSCDLCAPGHYGYPACLPCGCDPVGTQEDSCNQTLGVCNCQNSGQCVCKAA VSGQRCHKCISGFFALSSANPDGCSPCFCSGLSRECQEHTGLARAPITLAGPPALPLPLV SQSNLEGVTTGVYQQGGDIVLDSHHLNRSGLNAPLYWKLPPQFEGQQLLSYGGVLSYVVT FYAEEVRGLADQEPQVLMRGGALRKLLIYTDIPAPDSGIRTQHDIRLTEHKWRYFNSVSD KAVSHSDFLSVLGDLQYILVKASYGTRLQQSRISNITMETAREEREAGESGTARLIESCV CPPGYAGTSCQECAPGFFHQPLSELPPQARKSAFVRPCVACRCNNHSSSCDTHSGHCQEC QHHTEGSNCELCSPGYYGNVSGSVDDCSPCACPRVDNSFSPTCVSEGTLGDFHCTSCLTG YEGRYCERCSLGYYGNPSLLGGACTPCGCSTWGSLHPLCEQLSGRCRCKAGFKGPTCDQC DERHVLEGGQCLSCDDGCAGALLDDLDRMLAQLAAINISSAAVTSYRQLAVLDKRISEMQ LLFSERTSLEVPLHAVEEDSTQLTSDLGILIKQATNVSREWEQAGVAANDSLSLAGQMME KIERVQDRIEALAGEAEQLNRGAEEGLETADRTRLLDQMVFTMESMRAVNLSAPASSARL ELSLSESLLESLQHHFLPGTGNRLRLLVTSLTAQAQKLRELQTRLQDAAKDNEQTHLVIN ATNTLRARYQAAYQNVSFAHMCVEDVMEASQLLLNDVVNLMEAFANVTAQADTLGGELDQ WRPLLRRKVEALVMGLKSTDSLERVYQAESHAQLLDSHVLSLHSALSSVWNSSRNSSGLV LLDADVANGVNKARRIASDAWKSAGLAVNMTDQAQQFLSAEGGAGMSGIFAVLRESRAIN KTAEDIGLMVSGVIVRQRILRKSLHDNGVLLRQPIRELQSLFNGSQQPQDTRSQVALARS SLQEALQQLYSLKEQLQDSSSVVDKSNQSVAETNRLMMRTHTTADEAWRKLEEAEHRVQH LSDKIKPLSVLGESLRRNLSDIRVLIEQARRQAASIKVAVQADGDCVRSYRPQSQSSNFN TLILTLKTERPNNLLFYLGSETTVEFLAAEMHNGKVSLLWDVGSGSTRLEYPGLDIANNK WTIINATRLGSRGFLSVHQLEAAPSQTVTAASPGPARILHIDNATVVHIGGLANGTRRPA ALQWTTFRGCVGEASLDEKNVGLWNYIGQQGRCGGCFSSPQAEETAFHFDGSGFSLVQKS LRATSTSIVLLFKTLSPGGLLLYLASNNTRDFLSIELVEGCVRLTFDLGSGPLVLTSSRK YNTGMWYKVTLQRNRRKGYMSIMAADQSSEKEVLEAESPGTASDLNRSDHDPIYIGGLPA SRPIRRQVVSRSYVGCIKNVEIARLNFDLLRDAYGVRKGCILEAVRSVSMLSAGFIQIAP RPLAQEAEFLFSFKSNNQSGILLAAFTDDHAQRRHFLCVYLLHGSLEAELGEIGADGQRV AVTAAEGGSLTDGSKHSVIVNVNRKSLSIQVDESHVKSASLLPGRFPGLATASFFIGGLP SGDESQLPIRLQKLSKMFRGCIQHLVLGTQFIDLSSAVRYKGAALDSCLLEEKTSGAVLP EEEDAEATLKPSHLSAAVPPAQPTPLHLTCTPESDLRFLPTAAHFGSSPRSHMTFAIRPV AVRKRVSVRLSLRTRAQNGLLLLLTDDNQLNFAVLRLAAGRALMSADLGKGVATVTSSVA VNDGKWHTITADVSRRQLSVSVDGSAADSTTLRGNQLNVHGRLYLGGLPPAHITPRINVT SLRGCLHSVTVNGVTLDLSQPASQHDITSCFTEEEAGSYFNGSGYAALMRDGYKVGSDMS VSLEFRTSQSEGVLLGISSAKVDAIGLEMIKGQVVFNVNNGAGRVRVASGGPALCDGRWH RLLARKTKHSLSLSVDGRDNSVNNPYPQSTSAETNNPVFVGGYPDGMKQNCLSVKTGFRG CLKNVHLIKSHVSRPLDMSQAHFSLGVTPGSCPAA NT seq 9288 nt NT seq  +upstreamnt  +downstreamnt atgaaatcacattgggatgcggcccagagcccgcagcaacacattcttgaagcggggccg gccggcgcgcattccactctgactctgactcaagtcggcgtgactttcccgatgaacctg ctcgtgttgatgctgctgatgcagcaaacggcttcccagcagcgaggtctgttcccggcc attttgaacctggccactaatgccaagatcagcagcaacgccacctgtggagagccgcga gcggaagtttactgcaaactggtggagcacgtgcccgggcgcttgatcaagaaccctcac tgccccaagtgtgatggcaattcccttctgcttggagaacgccatcccatcaccaacgcc atcgacggaaccaaccgatggtggcagagtccgagcatcaagaacgggcgccaattccac tgggtcaccatcacgctggatttgaaacaggtcttccaagtggcttacatcatcatcaag gcagccaactctccccgaccggggaactggatcctggagcgctcggtggatggcgtcacc ttcgagccgtggcaattttacgccatcagcgactcggagtgcttgtctcgttacaacgtg gcacccaggcttggagcgccgacctacaaaggtgacacggaggtcatctgcacgtcctac tactccaggctggagccgttagagcacggagagatccacacatcgctgatcaacagtcga cccggtgcggatgatttgacctccgaactcttgaatttcacctcggcccgtttcatccga cttcgcttccagcgaatccggacgctcaacgccgacttgatgactctgagcgtgcacgac cctcgagacgtcgaccccatcgtaacccgccgatattattactccatcaaagacatctca gtgggggggatgtgcatctgctacggacacgcccgaagctgtcctctggatcctgtgacc aagaaactacagtgtgtgtgcgaacacaacacttgcggagtgagctgcgaccactgttgc cccggataccaccagcaaccatggcaaccgggaactatctctgtgggaaacacatgtgaa aagtgcaactgtcacaacaaagcaagcgactgcgtctacaatcaaacggtcgccgatctc ggcttgagcgtggacatgggcggcgttcgtcgtggaggcggagtctgcgttgagtgtcgg cagaacacggccggagtcaactgcgagacttgcgccgagcgttactacagacccgagcgg gtttctccttattccgagtggccgtgcctggaatgtgattgtgacccgcgaggtgcgagg tcttccatctgcaccagagacggcgccagcgcgggccagtgtgcatgtaaggaggggttc gcgggccggaggtgtgaccactgtgcctttggattccgagattttcccctttgcactcgc tgcgagtgcaacacggcgggcagcgtgaacggcgacccatgtgacgacgattgcgtttgc aaagccaatgtggcggggctccactgcgacttgtgcaaatcgggattctacaacctccaa gctgccaatccgctgggctgcaccgactgcttttgcttcggcgtgtcggacgtctgcgaa agctccacttggatggccgcgcaggtggtttcggcgggcgcttggctccacccttcctct tctgtccacaccaacctgactcaccaacttcccgcctccggcgacctctcctccagccat ggtcaaccacaagagctgcagtgggaggcgcccgacagtttcctcggcaacaagctgtcg tcctacggtggtctcctgaattattctgtcgcttatggcggctcactggacaacaacttt gtcccggccagcaccgacgtcatcgttcagggcaacgggcgagcgctccggctgtcgtcg cctcgcgtcctggtcctctcgccgtcggccaagcgctccgtcgccgtccacatgctcccc gatcaatttgtagaccagcaatcgggcgacccggtgagccgtgacgacctgctgtccgtc ttggctgaggtgacgtcgctgagggtcagagttcacctcaatgcctctgcgggcggagat gtgcgcctcgtctcggcgtccctcgatgtggccgactctcggtctgtgtctggtgtccgg gcagttgccgtggaaacgtgcgaatgtccctggggctacagcggaacttcctgtgagtcg tgcctcccgggcttttacagggtggctggagttttgttcggagggaactgtatgccgtgc gaatgcaatgaccacgcctccgactgcgatttcgccggcgtgtgtttgggctgtcgccat catacgacgggtccccactgcgatcagtgcctccccggtttctacggcgatgccaccgag ggcacagcggatgactgtcggcgttgcgcgtgtcccttgacggaggcgtccaacagtttc agcctgacgtgctccctggatgcttttggactggtgaagtgtgaccagtgtcaggaaggc tacaccgggagcacgtgtcacaagtgttccgacggtttctacggaaacccgcaggtagtg ggcgggtcctgcgtacgctgccaatgcaatgacaacgtggacaccgaggaggcgggccat tgtgacgccgtcaacggggagtgcctccgttgccgcaacaacacggccgggcggcactgt gaggtctgcgccgagggtttctatggcgacgccgtgcaccgaaagaattgccgagagtgc gcctgccacgtcgtcggatctttgtcaagcgtctgcgatgtcgcatcgggccaatgccaa tgtcgagacaatgcgacgggacgggcgtgcgaccgttgccagccgggcttctttgcatcg caggatggccagggctgcctggcctgcggctgtgaccccagggggtctttggaggagtcc tgtgacgcggatggccgctgccaatgcacgcttggtgtcgacggagataaatgtgaccgc tgtagccgcggttactttgatttccatgccaacggctgcaaagcgtgcaactgcaaacac acgggcgggaactgccaccaccaaactggggagtgcatctgccccccacacacagagggc gacacctgcgacacctgcgaggcgggatactggggtcaccatcccatcacgggctgcaag ctttgcaactgcagcccagagggaagctccgcctctcagtgcaatctgaccgatggccag tgtctgtgcagagtgggattctctggcaggtcatgtgacctatgcgctcccggtcactat ggttacccagcgtgcttgccgtgcggctgcgacccggtcggaacccaagaggactcgtgc aatcagacgctcggcgtgtgcaactgccaaaacagcggccagtgtgtgtgcaaggcggcc gtttcggggcaacgctgccacaagtgcatttcgggtttctttgcgctgtcgtcagcaaat ccggacggctgctctccgtgcttctgttcaggactcagtcgcgaatgccaggagcacacc ggcctcgccagagctcctatcacgttggccggccctccagctctgccgctacccttggtc agccagtcaaacctggagggtgtcacgactggagtctaccagcagggcggggacatagtg ctggacagccaccacttgaacaggagcggactgaacgctcctctttactggaagctgccc ccccaatttgaaggccagcagctgctgtcgtatggcggtgtgctgtcctatgtcgtgacc ttctatgcggaggaggtaagagggctggccgatcaggagcctcaagtgctgatgagggga ggagccttgaggaagctgctcatctacactgacatacccgcccctgacagcggcatcaga acccagcatgacatcaggctgacagagcacaagtggaggtatttcaactcggtgtccgac aaggcggtcagtcacagcgacttcctctcggtgctcggcgacttgcagtacattctggtc aaggcttcctacgggacgcgactgcaacagagcaggatctcaaacatcactatggaaacg gcacgggaagaacgggaagccggcgagtcgggcacggccagactgattgagtcgtgtgtc tgtccgccgggttatgccggaacgtcctgccaggaatgcgcgccgggtttcttccaccag ccgctgtcagaattgccgccacaggcccgcaagtctgcgtttgtgcgaccctgcgtggcg tgtcgctgcaacaaccatagcagcagttgcgacacacacagcggccactgccaggagtgc cagcatcacaccgaagggagcaactgtgagttgtgctctccgggctattacgggaacgtc agcggctccgtagacgactgctcaccgtgcgcttgcccccgagtggacaacagtttcagt cccacgtgtgtttccgagggaacgcttggagactttcactgcacttcctgtctgacggga tatgaggggcgctactgcgagcggtgctctctgggttactacggcaacccctcattgctg gggggggcatgcaccccgtgcggctgtagcacgtgggggtccctgcatcctctgtgcgag cagctgagcggccggtgccggtgcaaagccgggttcaagggtccaacgtgcgaccaatgt gatgagcgacacgtcttagagggaggccagtgcttgtcctgtgacgacggctgtgccggc gctctcctggacgacttggaccgaatgctcgcgcaattggcagccatcaacatcagcagt gccgccgtgacgtcctaccgccagctggcggtgctcgataagcggatcagcgaaatgcag ctgttattttcagaacgcacgtctttggaggtgccattgcacgcagtggaagaagactcc acacagctgacctctgacctcggcattttgataaagcaggccacgaatgtgtcacgggag tgggagcaagcgggggtggcagccaacgacagcttgtcactcgcgggtcaaatgatggaa aagattgagcgcgttcaagaccggattgaagcacttgccggggaggcggagcaactgaat cggggcgccgaggaggggctcgaaacggccgatcggacacgcctcctggaccagatggtc ttcacgatggaaagcatgcgagctgtcaatctgagcgctcccgccagctcggcacgtctt gagctcagtttgtcagagtctctcctggagtcgctccaacaccacttccttcccggcaca ggcaacaggctccgcctcctcgtcaccagcctcaccgctcaggcgcaaaagttgcgagaa ttgcaaacacgcctgcaagatgctgcaaaagataacgaacaaacgcacctcgttataaac gccactaacactctgcgtgcccgctatcaggcagcctaccagaacgtcagttttgcacac atgtgcgtggaggatgtgatggaagccagccagctcctgctaaatgacgtggtcaacctg atggaggcgttcgccaacgtcactgcccaagcagacacactgggaggcgagctggatcaa tggcgtcctctgctgaggcgaaaagtggaggctctcgtcatgggactgaagagcaccgat tcgctggaaagagtctaccaagcggagagccacgcccagctgcttgacagccacgtcctc tctttacacagtgctctgtcgtcggtgtggaactcttctagaaacagcagcggattggtg ctgctggatgccgatgtcgcaaacggcgtcaacaaggctcgccgaattgcctcggatgct tggaagtccgccggccttgctgtcaatatgaccgaccaagcacagcaattcctctcagcg gagggcggggccgggatgagcggaatttttgctgtgctccgcgagagtcgagcgatcaac aagacagccgaagatatcggtctgatggtgtccggcgtgatcgtgagacagcgaattctg aggaaaagtttgcacgacaacggcgtcctcctccgtcagccaatcagagagctgcagagt ctctttaacgggtcgcagcagccgcaggatacccggtcgcaggtcgcgcttgcgcgctcc agcctgcaggaggcgctgcagcaactctactccctcaaagagcagctgcaggattcttct tctgtggtggacaaaagcaaccaaagcgtggcagagaccaatcggctgatgatgcgcacg cacaccacagccgatgaggcgtggcggaaactggaggaggcggagcatcgcgtacagcat ttgagtgacaaaataaagccgctgagcgtgctgggagaaagtctacgcaggaacctgtca gacatccgagtgctcatcgagcaggccagaagacaagcggcgtcgattaaggtggcggtg caggcagatggcgactgcgtccgttcctaccgaccccaaagtcaatccagcaactttaac accttgattctgaccttgaagaccgagagaccaaataatctgctcttctatctgggcagc gagacaacggtggagttcctcgccgcggaaatgcacaatggcaaagtttctctgctctgg gacgtcggctctggcagcaccaggctggaatatccgggactggacatcgcgaacaacaaa tggaccatcatcaatgctacacggctgggctctcgtggattcctgtcggtgcatcagctg gaggcggcgccatcacaaacggtgacggcggcgtcacctggaccagcccggattctccac attgacaacgccacggtggtccatatcggagggctggcgaacggcacacggaggccggcc gcgttgcagtggactacctttaggggctgcgtgggcgaagcgtcgctagacgagaaaaac gtcggcctgtggaactacattgggcaacaagggcgatgtggaggctgcttcagcagcccg caggcggaggagacggctttccactttgacgggtccggattctccttggtccaaaagtct ctgcgagccacatccacatccatcgtcttattgttcaaaacgctgtcgccaggcggattg ctcttgtacctggcctccaacaacacaagggacttcctgtccattgagctggtggagggc tgcgtccgtctgacctttgacctcgggtctggtcctctggtcctaacctccagtaggaag tacaacaccggcatgtggtacaaggtcacgctgcaaagaaaccggcgcaaaggttacatg tcaatcatggcagctgaccaatcatcagagaaagaagtgttggaggcggagtcaccggga actgcgtccgatctcaatcgttctgaccacgaccccatctacatcggtggacttcccgct tcccgaccaatcaggcgacaggtggtctccagatcctacgtcggttgcatcaaaaacgtc gagattgcaaggttgaactttgacctgctgagagatgcctatggagtcaggaaaggctgc attcttgaggccgtgcggagtgtgtccatgttgagcgcgggcttcatccagattgctcca cgtccgctcgctcaggaggcggagtttctcttctccttcaaatcgaacaaccaatcggga atcctgttggccgccttcaccgatgaccacgcccagcgacggcacttcctgtgtgtctac ctgctccatgggtctttggaggcggagctcggggagataggtgcggacggtcagcgagtg gcagtcacagcggccgaaggcggatccctcaccgacgggtcaaaacactcggtcattgtt aacgttaataggaagtctctttccatccaagtcgatgagagccacgtcaaatcggcctcg ctgttgccgggcaggttccccgggctcgccacggcctcttttttcattggaggacttcct tcgggggatgagtcgcagttgccaatcagattacagaagctatccaagatgttcagaggc tgcatacagcacctggtgctcggcacccagttcatcgacctgtcgtcggctgtcaggtac aagggggcggcgcttgacagctgcctcctggaggagaaaaccagcggggcggtgcttcca gaagaggaggatgccgaagctactctgaagccttcccacctgtcagccgctgtcccgcct gcccagccgacgcctttgcacctcacgtgtacgcccgagtcagacttgcgattcctgccc acggcagctcactttggttcatcgccgcgaagtcacatgacttttgccatccggccagtc gccgtccgcaagcgcgtgtccgtgcgcctgtcgcttcgaactcgagctcaaaacggtttg ctgctgctcctgaccgacgacaaccagctgaactttgccgtcctgcggctggcagccggg cgggcgctgatgtcggcggacctcgggaagggcgtcgccaccgtcacctcctccgttgcg gtgaatgacggaaagtggcacacgatcaccgccgacgtcagtcggcgccagctttcggtc tctgtggacggctcggctgccgactcgacaacgctcagagggaaccagctgaatgtccac ggcagattgtacctgggcggactacctccggcgcacatcaccccaagaataaatgtgaca agcctccgaggttgtcttcactctgtgactgtgaacggcgtcacgctggatctctctcaa ccggcctcacaacatgacatcacttcctgtttcactgaggaggaggcgggaagttacttc aacggcagcggatacgccgcactgatgcgggacggatataaggtgggctctgacatgtcg gtgtctctggagtttcgtaccagccaatcggaaggcgtcttgcttggtatcagcagcgcc aaggttgacgccattggactggagatgatcaaaggacaggtggtgtttaacgtgaataac ggggcgggcagagtacgggtcgcctctggcggccccgcactgtgtgacggacgctggcac cgcctgctggccaggaagaccaaacacagcctgagcctgagtgttgacgggcgtgacaat tccgtcaacaacccctacccacaatccacctctgccgagaccaataatcccgtattcgtg ggcgggtacccagacggaatgaaacagaattgcctgtccgtcaagacgggctttagaggt tgtctgaagaacgttcatctcatcaagtcgcacgtcagcagacctctagacatgagccag gcccacttctcattgggggtcaccccaggctcgtgtcctgctgcctag

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