Syngnathus scovelli (Gulf pipefish): 125985820
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Entry
125985820 CDS
T08785
Name
(RefSeq) cyclic nucleotide-gated channel beta-3-like
KO
K04953
cyclic nucleotide gated channel beta 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125985820
Ion channels [BR:
sscv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125985820
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
125985820
NCBI-ProteinID:
XP_049604941
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Position
18:8811326..8816658
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AA seq
729 aa
AA seq
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MFTRLKALVGAPEPPPAGAAKPPEIKETPQPKAETKQEEPAKENKKDEEKKEEPAKESQN
KKEEEKKEEEPKKEEPKPVPAPEAPANPVSPEGAEGDEKAASPPPPPVVYSRCTDETLRW
LVKTMRDKTELLKEKVIDPYATSPEITPPVTPILKKDEYHKLKEEERIAKEEAEKKKAEE
AAKKAEEKKKKDEEKRLEAEKKAEEERIAEEALKKKKMLPDIQFTLLDILFRPLEEKLDT
VLGSTIDPFTDRRYITWLGIIALAYNYNIWFCTARLAFPFHNDTANRYWITLDFLSDLIN
VVDIMVWQPRLQFVKAGDIIKHRAMTKEHYRKSPRFKTDIISVLPFDLLCLYFDFSAIYR
LNRFIRIESFFEFSDRLESVMAKAYIWRVARTTGYLLFSLHINACAFYVASVYQGLGTST
WVYNGNGTAYIRCYYFAVRSLINIGGLPEPTNTYEISFQMTNFFIGVFVFSSLIGQMRDV
IGAATAGQTYFRASMDGCVSYMNTYTISKVVQNRVRTWYNYTWAAQGMLDESELLDKMPL
VMRTAIAVDINLATFQKIALFQGCDQQMLVDMLLRLKSIIYLPGDFVVKKGDIGKEMYII
KSGAVQVVGGPDNSIVFVTLKAGCVFGEISLLQSAKDGGNRRTANVKAYGFANLFVLEKK
DLFDILVHYPESQKVLARKGRKLTKAKQPPGAKDEEKPKGLAGFGLRPPTPKIMKAFANF
RKLKKQQQA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaaggttaaaggcgcttgttggggctcctgagcctccaccagctggagcagct
aagcctcctgaaatcaaggagacccctcaaccaaaagcggagacaaagcaagaggaacca
gcaaaagagaacaaaaaagatgaggaaaagaaagaggaaccagcaaaagaaagccagaac
aaaaaagaggaggaaaagaaagaggaagaacccaagaaagaagaaccaaagccagttcct
gccccagaggctcctgcaaatcctgttagtccagagggagcagaaggtgacgagaaagca
gcatcacctcctccacctcctgtggtctactcccgttgcacggacgagactctcagatgg
ttggtcaaaacgatgagggacaaaacggagttgctcaaagagaaagtcattgatccgtac
gccacctctccagaaatcaccccgcctgtcacgcccattctgaagaaggatgaataccac
aaactgaaggaagaggagcggatagcaaaagaagaagcggagaagaagaaggcggaggag
gcagccaaaaaggccgaggagaaaaagaagaaggatgaggagaaaaggctggaagctgag
aaaaaagcagaagaggaaagaatagcagaagaggccctcaagaaaaaaaagatgctccca
gatattcaattcactttgctggatatcctcttccgacctttagaagaaaaactagatact
gtcctgggatccaccatcgatcctttcacggatcgtcgttacatcacttggttgggcatc
atagcgctggcgtacaactacaatatttggttctgcacggcccgcttggctttccccttc
cataacgacacggccaaccgatactggatcactttggattttctgagcgacctgataaac
gttgtggacatcatggtttggcagcctcggcttcagtttgtcaaagctggtgatattatt
aaacacagggccatgacgaaggaacattatcggaaatcacctcgttttaagactgacatc
atctccgtccttccctttgaccttctctgcctttactttgacttttctgccatttaccga
ctcaaccgcttcatcaggattgagtctttctttgaattcagtgatcgacttgagagtgtc
atggccaaagcttacatctggagagtggctcgcaccaccggctacctcctcttcagcctc
catatcaatgcgtgcgctttctacgtcgcctcagtataccagggcctcggcaccagtacg
tgggtctacaacggaaacgggacagcgtacatccgatgctactacttcgcagtacgcagc
ctgatcaatatcggcggacttcctgaacccacaaacacttatgagatatcctttcagatg
accaactttttcattggcgtctttgtgttctccagcctgattggccagatgagagatgtc
attggagcagcaacagcaggtcaaacgtatttccgggcatcaatggatggctgcgtatct
tacatgaacacttacacaatttcaaaggtggtccagaatagagtaaggacctggtacaac
tacacgtgggctgctcagggcatgcttgatgagtccgagctgctggataaaatgcctctg
gtgatgagaaccgccattgccgtggacatcaacctggcgaccttccagaagattgctctc
tttcagggctgtgaccagcagatgttagtggacatgctacttcggctcaaatcaattatt
tatcttcctggagattttgttgtgaagaaaggtgacatcggtaaagagatgtacatcatc
aagagcggagcggtgcaagtggtgggaggacctgacaacagtattgtttttgtcacacta
aaggctggctgcgtctttggagagatcagtttgctgcagtctgccaaagatggagggaac
agaaggacggcgaatgtcaaagcgtacggattcgctaatctctttgttttagagaaaaag
gatttgtttgatatcctggtgcactacccggagtctcagaaagttctggcccgaaaggga
aggaaattgaccaaggccaaacaacctccaggtgctaaagatgaggaaaagccaaaaggt
ctggctggctttggcctcagaccaccaacaccaaaaatcatgaaagcgtttgccaacttc
cgcaaactcaagaaacaacagcaagcgtga
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