Syngnathus scovelli (Gulf pipefish): 125985890
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Entry
125985890 CDS
T08785
Symbol
gtf3ab
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIIA, b
KO
K09191
general transcription factor IIIA
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125985890 (gtf3ab)
03021 Transcription machinery [BR:
sscv03021
]
125985890 (gtf3ab)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125985890 (gtf3ab)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
125985890 (gtf3ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
TFIIIA_zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_8
DUF7066
zf-C2H2_3rep
zf_ZIC
YdjO
Motif
Other DBs
NCBI-GeneID:
125985890
NCBI-ProteinID:
XP_049605085
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All DBs
Position
18:11765111..11766807
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AA seq
313 aa
AA seq
DB search
MGEQLQCPKSYICSFLECKAEFSKSWKLEAHLCKHTGLKPFSCESCDKSFCSRYALTRHE
LNHSGEKRHKCPTDGXNHIARVHQHEETRYKCTQDGCQSSFKKKYQLKAHVGNHQGRLPF
RCGLDDCVREFPSLGKLKRHEKMHKGYPCENELCPFVAKTWSEYQKHRKEHKVKLPCLTC
EKHFNNSWFLRQHEFHRHTLEKASFPCPKEGCAKTFTRRFNLDIHIQGEHEGKKPFSCAY
PSCGKNFTMKESLWRHGVVHDPLKKKLKKLYPRKKQQQQQQQTWSGAQAKLQGAETNKLA
AKLHKIHLEDLKS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgggagagcagttgcaatgtccaaaaagttacatctgctcctttttggagtgtaaggcc
gagttctcaaagtcgtggaaactcgaggcccacctgtgcaagcacacgggattgaaaccg
ttctcctgcgagagctgcgacaaaagtttctgctcccgctatgcgctcaccaggcatgag
ctcaaccacagcggcgagaagcgacacaagtgcccgacagatgganagaatcacattgct
cgagtgcaccagcacgaggagacacgatataaatgtacacaagacggctgccaaagtagc
ttcaaaaagaaataccagctgaaggcccacgtggggaaccatcaaggccgtttgcctttt
cgttgcggtttggacgactgcgtgcgggagttcccctcgcttggtaagctgaagcgccac
gagaaaatgcataaaggttacccctgtgaaaacgagctgtgcccttttgtggcaaaaacg
tggtccgagtatcagaagcaccgtaaggagcacaaagttaagctgccatgcctgacgtgc
gagaagcacttcaacaacagctggttcctgcgccagcacgagttccaccgccacaccctg
gaaaaggccagcttcccgtgtccgaaagaaggctgcgccaagacgtttacccgccgcttc
aacctggacatccacatccagggggagcacgaggggaagaagcccttcagttgcgcgtac
cccagctgcggcaagaacttcaccatgaaggaaagtctgtggcggcacggagtggtacac
gatcctctcaagaaaaagctgaagaagttgtatcccaggaagaagcagcagcagcagcag
cagcagacgtggagtggcgcacaggccaagctgcaaggtgctgagaccaacaagcttgct
gccaagttgcacaagattcatttagaagaccttaaatcttga
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