Syngnathus scovelli (Gulf pipefish): 125985916
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Entry
125985916 CDS
T08785
Symbol
zic1
Name
(RefSeq) zinc finger protein ZIC 1
KO
K09224
zinc finger protein ZIC 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125985916 (zic1)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
125985916 (zic1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf_ZIC
zf-C2H2_15
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_8
zf-C2H2_jaz
DUF959
zf-met
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
125985916
NCBI-ProteinID:
XP_049605130
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Position
18:complement(4287953..4291472)
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AA seq
460 aa
AA seq
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MLLDAGPQYPAIGVTTFGSTRHHSTGEVTEREVALGINPFADGMGAFKINHGSHEQTAFS
TQAPAGYAAAAALGHHHHHHHHHPGHVGSYSTAAFNSTRDFLFRNRGFGEAAGAQHSLFA
SAAAAAGGFAAGPHGHSEAAGHLLFPGLHEQAAGHASSNVVNGQMRLGFGGDVYGRAAAE
QYGHVTSPRSDYTSTQLHGYGPMNMNMAAHHGAGAFFRYMRQPIKQELICKWIEPEQLAS
PKKSCNKTFSTMHELVTHLTVEHVGGPEQTNHICFWEECSREGKPFKAKYKLVNHIRVHT
GEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFKCEFDGCDRRFANSSDRKKHMHVHT
SDKPYLCKMCDKSYTHPSSLRKHMKVHEASNPGSQPSPAASSGYESSTPPTIVSPSAENP
SSGSSISPTAPVAVQHHAATTTTAGSHSGALTSNFNEWYV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctcctggacgccggaccccagtaccccgccataggagtgaccactttcggctctacg
cggcaccactcaacgggtgaggtgacggagcgggaggtggcgcttggtatcaacccgttc
gcggacggcatgggcgccttcaaaatcaaccacggctcccacgagcagacggcgttctcc
acgcaggcgcccgccggctacgcggcggcggccgccctgggccaccatcaccatcaccac
caccaccacccgggccacgtgggctcttactccacggcggccttcaactccacgcgggac
tttctgtttaggaaccgtgggttcggcgaggcggcgggtgcgcagcacagcctctttgct
tcggcggcggcagcagcgggcggcttcgccgcgggaccccacggacactcggaagcggcg
ggccacctgctcttcccggggctgcacgagcaggcggcgggccacgcgtcctccaacgtg
gtcaacggccagatgcgcctgggcttcggtggggacgtgtacggtcgcgccgcggccgag
cagtacggccacgtcacgagcccgcgctcagactacacgtccacgcagctgcacggctac
ggccccatgaacatgaacatggcagcacaccacggcgccggggccttcttccgctacatg
cggcagcccatcaagcaggagctcatctgcaagtggatcgagcccgagcagctggcaagc
cccaagaagtcgtgcaacaagacgttcagcaccatgcacgagctggtcactcacctgacc
gtggagcacgtgggggggccggagcagaccaaccacatctgcttctgggaggagtgctcc
cgcgagggcaagcccttcaaggccaagtacaagctggtcaatcacatccgcgtgcacacg
ggcgagaagcccttcccgtgccccttccccggctgcgggaaagtcttcgcgcgttcggaa
aacctgaaaattcacaaaaggacgcacacgggtgagaagccgttcaagtgcgagttcgac
ggctgcgatcgccgctttgccaacagcagcgaccgcaagaaacatatgcacgtgcacacc
tccgacaagccctacttgtgcaaaatgtgcgacaagtcctacacgcacccgagttccctg
cgcaaacacatgaaggtacacgaagcgagcaacccgggctcccagccgtctccggcggcc
agctcgggatacgagtcgtccacgccccccaccatcgtgtccccgtcggcggagaacccg
agcagcggcagctccatatcgcccacggcccctgtggcggtgcagcaccacgccgccacc
accacgacagcgggcagccacagcggcgcgctcacgtccaatttcaatgaatggtacgtg
taa
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