Syngnathus scovelli (Gulf pipefish): 125985942
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Entry
125985942 CDS
T08785
Symbol
cdh7a
Name
(RefSeq) cadherin-7a
KO
K06799
cadherin 7, type 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125985942 (cdh7a)
Cell adhesion molecules [BR:
sscv04515
]
Cadherins
Major cadherins
125985942 (cdh7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
125985942
NCBI-ProteinID:
XP_049605168
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Position
18:complement(6215348..6259600)
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AA seq
816 aa
AA seq
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MMARCCSAVRRAPALLALLGLLLSIQGACSGPDGGGGSGDRDESGATPRGGPHRHRRSWV
WNQFFVLEEFTGNEPLYVGKLHSDVDKGDGKVKYVLSGEGATSIFTIDENTGDIHATKRL
DREAQAYYTLQAQAVDRLSNLPVEPRSEFVVKVQDINDNEPKFLDGPYLAGVPEMSPLGT
MVVQVAATDADDPTYGNSARVVYSIVHGQPYFSVEPKTGVIRTALPNMDRETRDQYVLVI
QAKDMVGQMGGLSGTTSVTVTLTDVNDNPPRFPHKVNQYTVLESLPVQSVVARIKAADAD
VGPNAEMDYRIMDGDGPGVFNITTDENTQEGVLLLLKPLDFESKNSFSLRVEATNRNIDS
NFLNLGPFSDTTSLKVSVEDVDEVPVFASPLSTMSVSEDARVGTSIGKVSAHDPDTSDSS
IRYSIDRNTDMERFFNVDALSGIISTAKPLDREVNSVHNITILAVESQDPNQIGKGAAVI
TVLDVNDNAPVFAIDYETLVCENAPAGTVIQTVSGVDKDEPQNGHRFFFSLDAAVAGNLN
FTLRDNKDNTASILTKRGAFRRREQPAYRLPVLIADSGSPALSSTNTLSVRVCECDADGV
PLACGAVAYAATGLGTGALLAILGCILTLLVIVLFIVTARRRRKVPLILEEERDIRENIV
RYDDEGGGEEDTEAFDMVALRNLNVIRDPGARRDVTPDTPTFFQYTPASSATTRPAYKSL
PDNVVFREFIWERLKDADVDPWAPPYDSLQTYAFEGSGSVADSLSSLESLSTDSEQNYDY
LNNWGPRFKKLADLYGNADGATGVFSKPLNAGRGGH
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcggtgctgctcggccgtgcgcagagccccagctctcctggcgctccttggc
ctcctgctttccatccagggagcttgctcggggcccgacgggggcggcggctcaggagac
cgggacgagtcaggtgcaacccctcgagggggcccgcacagacacagacgcagctgggta
tggaaccagttcttcgtgctggaggagttcacaggaaacgagccgctctacgtgggaaag
cttcactcggatgtggacaagggcgatggcaaggtgaagtatgtgctgtcgggcgagggc
gccacctccatcttcaccatcgacgagaacacgggcgacatccacgccaccaagaggctg
gaccgggaagcgcaggcctactacacgctgcaggcgcaagccgtggaccgactcagcaac
ctgcccgtcgagccgcgctccgagtttgtggtcaaggtgcaggacatcaacgataacgag
cccaaatttctcgacggcccctacttggcgggagtgccagagatgtcgccgctaggaact
atggtggtgcaagtggcggccaccgacgccgacgaccccacgtacgggaacagcgccagg
gtggtgtacagcatcgtgcacggacagccctacttctccgtggagcccaagacaggtgtc
atccggacagctttgcccaacatggaccgcgagacccgcgaccagtacgtgctggtcatc
caggccaaggacatggtgggccagatgggcggcctctcgggtaccacttccgtcaccgtc
acgctcaccgacgtcaacgacaacccgcctcgcttccctcacaaggtcaaccaatacacg
gtgctggagtcgcttcccgtgcagtcggtggtggcccggatcaaggcggctgacgccgac
gtgggccccaacgccgagatggactacaggatcatggacggcgatgggcccggcgtcttc
aacatcaccacggacgagaacacgcaggagggagtcctcctcctgttaaagcctctggac
tttgaaagcaagaacagcttctctctgcgggtggaggctaccaacaggaacatcgactcc
aacttcctgaacttgggccccttcagcgacaccacctcgctcaaggtgagcgtggaggat
gtggacgaggtgcccgtcttcgcctcgccgctcagcaccatgtccgtctccgaggacgcc
cgggtcggcacgtccatcgggaaggtgtcggcccacgatccggacacctccgacagcagc
atcaggtattcgatcgaccgcaacacagacatggagcgcttcttcaacgtggacgcgctg
agcggcatcatcagcacggccaagccgctggaccgcgaggtcaactcggtgcacaacatc
accatcctcgccgttgagagtcaggaccccaaccaaattggcaaaggcgcggccgtcatc
accgtgctggacgtcaacgacaacgcgcccgtcttcgccatcgactacgagacgctggtg
tgtgaaaacgcgccggcgggcacggtgattcagacggtgagcggcgtggataaggacgag
cctcagaacggtcaccgcttcttcttctccttggatgccgccgtggcgggaaatctcaac
ttcaccctccgagacaacaaagataacacggcgtccatactgaccaaacgcggcgccttc
cggaggcgcgagcagccggcgtaccggctgcccgtgctgatcgccgacagcggcagcccg
gccctgagtagcaccaacacgctgtcggtgcgcgtgtgcgagtgtgacgccgacggcgtt
cccctggcgtgcggcgccgtggcctacgccgccaccggtctcggtaccggcgctctcttg
gccattctgggctgcatcctcacactgctggtgatcgtcctcttcatcgtgacggcgcgc
cggcggcggaaggttccgctcatcttggaggaggagcgtgacatccgggagaacatcgtc
cgctacgacgacgagggcggtggcgaggaggacacggaggccttcgacatggtggccttg
cgcaacctcaatgtcatccgagaccctggcgcgcggcgggacgtcacccccgacacgccc
accttcttccagtacacgcccgccagctcggcgacgacccgcccggcctacaagtcactc
ccggacaacgtggtgttccgtgagttcatctgggagcgtctgaaggacgccgacgtggac
ccgtgggcgccgccgtacgactcgctgcagacgtacgccttcgagggcagcggctcggtg
gccgactcgctcagctcgctggagtcactcagcaccgactcggagcagaactatgattac
ctcaacaactgggggccgcgcttcaagaaactggccgacctctacggcaacgccgacggc
gccaccggcgtcttctcgaagcctttgaatgcaggaagaggaggacactga
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