Syngnathus scovelli (Gulf pipefish): 125986032
Help
Entry
125986032 CDS
T08785
Symbol
chpf2
Name
(RefSeq) chondroitin sulfate glucuronyltransferase
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sscv01100
Metabolic pathways
Module
sscv_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
125986032 (chpf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sscv01003
]
125986032 (chpf2)
Enzymes [BR:
sscv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
125986032 (chpf2)
Glycosyltransferases [BR:
sscv01003
]
Glycan extension
O-Glycan
125986032 (chpf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
125986032
NCBI-ProteinID:
XP_049605327
LinkDB
All DBs
Position
18:complement(5828137..5832582)
Genome browser
AA seq
763 aa
AA seq
DB search
MRISSLLAVFRPALPLILGVSLGCTLSLLMVSWTQGDAEDGCRKELANGGKLYLGRGNAQ
SDARDDARAGEGGEDDFQPRIVPYHKDPNQQHKKVLRTRYIHTELGIRERLLVAVLTSRA
TLNTLAVAVNRTVAHHFPRTFFFTGLRSAKAPHGMAVVAHGDDRPVWLMYETVRHLHRQH
GADYDWFLLAQDDTYMQAERLMALVGHLSAGQDLYMGRAEEFIGGEEKARYCHGGYGYLL
SRSLLARLQPHLDACRNDILSVRPDEWLGRCIIDYLGLSCSEVHQEMTYRYFELGKNADP
EREDCPGFKLAFTVHPVSEPNLMYRLHKRFSQIELDGTYAQIQELQTQISNLSELTPEGA
AGATWPVGINAPFKPRTRFEVLNWDYFSEEHIHACADGAPKCELRGADRADVAGVLEAAL
ERLNARYQPRLRFLKRRLLNGYRRFDPTRGMEYVLDLALEAYTQKGRSRVIAKRVQLLRP
LSAVEIIPMPYVTEATRVQLILPVTAQESRQVAAFLDTYAANTLDTRDNALLTVLFVYDP
FEAQRVSREDVFAGAKAAVGQTEKRYRDIKIPWISVKTEVPSQVKLMDVISKKHPVDTLF
FLASVWTEVNGDFLNRCRMNAISSWQVFFPVHFQEFSPAVAPRPSVASADPLRDGRFDRR
VFDEACFYNSDYMSTRAKMAAEALDNEELLESMDVYDVFVRYSGLHVFRAVEPALVQKYA
ARQCNPRLSEDIYHRCVLSNLEGLGSRSHLAAALFQHEQANST
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatttcgtccttattggccgtgttccggcccgctttacccctgatcctcggggtg
tctctggggtgcaccctaagcctgctgatggtgtcgtggacgcagggggacgcggaggac
ggctgccgtaaagagttggccaacggtgggaagctttacctgggtaggggcaatgctcag
agtgatgcaagggacgatgcaagagcaggagaaggcggcgaggacgacttccagccgcgc
attgttccctatcacaaggaccccaaccagcagcacaagaaagtcctgagaactcgttac
atccacacggagctgggcatccgcgagcgcctcctcgtggccgtgctgacgtcgcgcgcc
accctcaacacgctggcggtggcagtgaaccgcacggtagcgcaccacttcccgcgcacc
ttcttcttcacgggcctgcgcagcgccaaggcgccgcacggcatggcggtggtggcgcac
ggtgacgaccggcccgtctggctcatgtacgagacggtgcgccacttgcaccggcagcac
ggcgccgactacgactggttcctgctggcccaggacgacacctacatgcaggcggaacgg
ctgatggcgctggtgggccacctgagcgccggccaggacctgtacatgggccgcgccgag
gagttcattggcggcgaagagaaggcacgctactgccacggcggctacggctacctactg
tcgcgcagcttgctggcgcgcttgcaaccgcacttggacgcctgccgcaacgatatcctc
agcgtcaggcccgacgagtggctgggccgctgcatcattgactacctgggactcagctgc
tcggaggtccaccaggagatgacctaccgctacttcgagctgggcaagaacgcagaccca
gagcgcgaggactgccctgggttcaagctcgccttcaccgtgcatcccgtgtcggagccc
aacctcatgtaccgactgcacaagcgcttcagccaaatcgagctggacgggacctacgcg
cagatccaggagctgcagacgcagatcagcaacctgagcgagttgacgccagagggcgcg
gcgggcgccacctggccggtgggcatcaacgcgccattcaagccccgcacgcgcttcgag
gtgctcaactgggactacttcagcgaggagcacattcacgcctgcgccgacggcgcgccc
aagtgcgagctgcgtggcgccgaccgcgccgacgtggctggggtgctggaggcggcgctg
gagcggctcaacgcccgctaccagccgcggctgcgcttcctcaagcgccgccttctcaac
ggctaccgccgcttcgaccccacccgcggcatggagtatgtgctggacctggcgctggag
gcgtacacgcagaagggccgcagccgagtcattgccaagcgggttcagctgctgcgcccg
ctcagcgctgtggagatcatccccatgccctacgtgacagaggccacgcgggtgcagctg
atcctgcccgtcacggcacaagagagtcggcaggtggccgccttcctggacacctacgcc
gccaacacgctggacacccgtgacaacgcgctcctcaccgtgctctttgtctacgacccc
ttcgaggcgcagcgcgtcagccgcgaggacgtcttcgctggcgccaaagcggccgtgggc
cagaccgagaagcgctaccgcgacatcaagatcccgtggatcagcgtcaagaccgaggtg
ccgtcgcaggtcaagctgatggatgtcatctccaagaagcacccggtggacacgctcttc
ttcctggccagcgtgtggacagaggtcaacggcgacttcctcaaccgctgccgcatgaac
gccatcagcagctggcaggtcttcttccccgtgcacttccaggagttcagcccggccgtg
gcgccgcggccgtccgtcgcctccgccgacccactccgggatggccgctttgaccgacgt
gtcttcgacgaggcctgcttctacaactccgactacatgagcacgcgggccaagatggcg
gccgaggcgctggacaacgaggagctgctggagagcatggacgtgtacgatgtctttgtg
cgctactcgggcctgcacgtcttccgggccgtggagccggcgctggtgcagaagtacgcg
gcgcgccagtgcaacccacgcttgagcgaggacatctaccacaggtgcgtgctcagcaac
ctggagggactgggctcccgctcacacctcgccgctgcactcttccagcacgagcaggcc
aacagcacctag
DBGET
integrated database retrieval system
