Syngnathus scovelli (Gulf pipefish): 125986044
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Entry
125986044 CDS
T08785
Symbol
asap1b
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125986044 (asap1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125986044 (asap1b)
Membrane trafficking [BR:
sscv04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
125986044 (asap1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
PH
Ank
SH3_1
Ank_4
SH3_9
BAR
SH3_2
Ank_3
Ank_5
7TMR-HDED
DUF4404
Motif
Other DBs
NCBI-GeneID:
125986044
NCBI-ProteinID:
XP_049605346
LinkDB
All DBs
Position
18:5845766..5864549
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AA seq
1137 aa
AA seq
DB search
MAFKMVDSCGRALTSTHRANRGSVEYVEGQDETSANAFVFAFFSRVLRRSAPQALDQDRT
SLQKVKKSVKAIYNSGQDHVQNEENYAQALDKFGSNFISRDNPDLGTAFVKFSSLTKELS
ALLKNLLQSLSHNVIFTLDSLLKGDLKGVKGDIKKPFDKAWKDYEAKFTKIEKEKREHAK
QHGMIRTEITGAEIAEEMEKERRLFQLQMCEYLIKVNEIKTKKGVDLLQNLIKYYHAQCN
FFQDGLKTADKLKQYIEKLAADLYNIKQTQDEEKKQLTALRDLIKSSLQLDQKEDSQSKQ
GGYSMHQLQGNKEFGSEKKGYLLKKSDGLRKVWQRRQCSVKGGILTISHATSNRQPVKLN
LLTCQVKPSGEDRKCFDLISHNRTYHFQAEDEQEFVIWISVLTNSKEEALNMAFRGEQSS
GGEDGLEDLTKAIIDDVLRMPGNELCCDCGAADPKWLSTNLGILTCIECSGIHREMGVHI
SRIQSMELDKLGTSELLLAKNVGNSSFNEIMEGNLPSPSPKPGPSSDMTVRKEFITAKYV
DRKFARKTCSSAAAKMVELYEAVRTRDLLALVQVYAEGVELMEPLPEAAPEAGETALHYS
VRTADQTSLHLVDFLVQNSGNVDKQTERGNTALHYCCMYEKPECLKLLLRGKPATDITNQ
NGETALDVARRLRNTPCEEALVQAAEGKFNPHIHVEYEWSLRLEEMDESDDDLDDKPSPI
KKDRSPRPQSFCHSSSLSPHDKLSLPGFISQRDKQQRLSYSAFSNQMYSASTDLTSSPVA
DGPPLPPRNQGKAAAVAAASSALTAGGSATLSKKRPPPPPPGHKRTLSDPPGPLCHTRGG
PSGGELQAHGSDSTPPPVNKMSPVSNKFEGIPQQQSTTSSNTKSTLGPRVLPKLPQKVAL
RKIDTIHHPSVDKAGLPPEVFQKSPPGMDALQKAPAPERPQPADPPPKPQPSELPPKPGE
LPPKPQLSDLPPKPQLGDLPPKPQLKDLPPKPHLADAPPRVGAAEAAPRPPGDAPARPQT
QPPPPPQPQPPESPSPDRPAPPPPPQQSADDADGSPPGSAETPVPLPRKINTGKSKARRV
KTIYDCQADNDDELTFVEGEIIVVTGEEDQEWWIGHVEGEPERKGVFPMSFVHILSD
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaagatggtcgacagctgtggacgggccttgacgtcgacacaccgagctaat
cgcggtagcgtagagtacgttgaaggacaagacgagacaagcgcaaatgcgttcgtgttt
gcttttttttcccgagtgctgcgtcggagcgctccacaggcgctggaccaggaccgaacc
tccctgcagaaggtgaagaaatccgtcaaggccatctacaattcaggacaagatcatgtc
caaaatgaggaaaactatgcccaagctctggacaaatttggcagcaacttcatcagccgg
gacaaccctgacctgggcacagccttcgtcaagttctcctcgctcaccaaggagctctcg
gccctcctgaagaacctgctccagagcctgagtcacaatgtcatcttcaccctggattcg
ctgctcaagggagacttgaagggcgtcaaaggggacataaagaagccctttgacaaggcc
tggaaggactacgaggccaagttcaccaaaatcgagaaggagaaacgggagcatgccaag
cagcacggcatgatccgcactgagatcactggggccgaaatcgctgaggagatggaaaag
gagcgtcggctcttccagctgcagatgtgcgagtacctgattaaagtgaacgagatcaag
accaagaaaggcgtggacctcctccagaacctcatcaagtattaccatgcacagtgcaat
ttcttccaggacggcttgaagacggccgacaagctgaagcagtacatcgagaagctggcg
gccgacctctacaacatcaaacaaacccaggatgaggagaagaagcagctgaccgccctg
cgcgatctcatcaagtcctccctccagctggaccagaaggaggactcgcagagtaaacaa
ggtggctacagcatgcaccagctgcagggcaacaaggagtttggcagcgagaagaaaggc
tacctgctcaagaagagcgacgggctgaggaaggtgtggcagcgcaggcagtgctcggtg
aagggcggcatcctcaccatctctcatgccacatccaacaggcagccggtgaagctcaac
ctcctcacctgccaggtcaaacccagcggcgaggataggaaatgttttgatctcatttct
cataaccgcacgtatcacttccaagctgaggatgagcaggagtttgtcatctggatctcg
gtgctgaccaacagcaaagaggaggccctgaacatggccttccgtggtgagcagagcagc
ggcggcgaggacggcctggaggacctcaccaaagccatcatcgatgacgtgctccgcatg
ccgggcaacgagctgtgctgtgactgtggcgccgcagatcccaaatggctgtccaccaac
ctgggcatcctgacgtgcatcgagtgctccggcatccaccgagagatgggcgtgcacatc
tcccgcatccagtccatggagcttgacaagctgggcacctccgaactcttgctggccaag
aacgtcgggaatagtagtttcaacgagatcatggagggcaacctgccgtccccttcgccc
aagcctggcccctccagcgacatgacggtgaggaaggagttcatcaccgccaagtacgtg
gaccgcaagtttgcccgcaagacgtgctcgtcggcggcggccaagatggtggagctctac
gaggcggtgcgcacccgcgacctgctggcccttgtccaggtctacgccgagggcgtggag
ctcatggagcctctgcccgaggccgccccggaagccggagaaacggcgctgcactactcg
gtccggacggccgaccagacctcgctgcacctggtggacttcctggtgcagaacagcggt
aatgtggacaagcagacggagcgcggcaacacggccctccattactgctgcatgtacgag
aagccagagtgcctcaagctgctgctcaggggcaaaccagccaccgacatcaccaatcag
aacggggagacggcactggacgttgccaggcgactgaggaacacaccttgcgaggaggcg
ctggtgcaggcggccgagggcaagttcaaccctcacatccatgtggagtacgagtggagc
ctccggctggaggagatggacgagagcgacgacgacctggacgacaagcccagtcccatt
aagaaggaccgctcgccgcgaccgcagagcttctgccactcgtccagcctgtcgccgcac
gacaagctctcgctgccgggcttcatcagccagcgtgacaagcagcagcggctgtcctac
agcgctttcagcaaccagatgtacagcgcctccaccgacctcacttcctcgcccgtcgct
gacggcccgccgctaccgcccaggaatcagggcaaagctgccgccgttgccgccgcctcg
tctgcgctgacggcgggaggcagcgccacgctgtccaagaagaggccgccgcccccgccg
cccggccataaacgcacgctgtccgacccgcccggcccgctctgtcacaccagagggggt
ccgtccgggggggagctgcaagcccacggaagcgactccacgccgcctcccgtcaacaag
atgtcgccagtctccaacaaatttgaaggcatccctcagcagcagagtacgacttcaagc
aacacaaagtccacacttggtccaagggttcttcctaaactacctcagaaagtggcgttg
cgtaagatcgacaccatccaccacccctccgtggacaaagccggcctcccccctgaggtc
ttccagaagtctccgccggggatggacgctttgcagaaagcgccggccccggagcggccg
cagcctgccgacccgccgcccaagccgcagccgtccgagctgccgcccaagcctggggaa
ctcccgcccaagccgcagctctccgacctgccacccaagccgcagctgggcgacctgccg
cccaaaccgcagcttaaggacctgccgcccaagccccacctggccgacgcgccgcccaga
gtgggggcggctgaggcggccccacgcccgccgggggatgcgccggccaggccccagacg
cagccgcccccgccgccgcaaccccagccgccggagtcgccgtcgcccgatcggccggcc
ccacccccgccaccgcagcagagcgccgatgatgccgacggaagcccacctgggagcgcg
gagacccccgtgcccctccccaggaaaatcaacacggggaagagcaaggcgcgacgcgtg
aagaccatctacgactgccaagctgacaatgacgacgagctgacgttcgtggagggcgag
atcatcgtggtgacgggcgaggaggaccaggagtggtggatcggccacgtcgagggcgag
ccggaacgcaagggcgtcttccccatgtcctttgtgcacatcctcagcgactga
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