Syngnathus scovelli (Gulf pipefish): 125986055
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Entry
125986055 CDS
T08785
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125986055 (scrib)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_8
PDZ_6
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
125986055
NCBI-ProteinID:
XP_049605368
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All DBs
Position
18:4952764..4979393
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AA seq
2016 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQAVPDEVFRYSRSLEELLLDANQLKELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCRALEIADFSGNPLSRL
PDGFTQLRALAHLALNEVSLQTLPGDIGNLANLVTLELRENLLKCLPTSLSFLVKLEQLD
LGSNELEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENRLEELPSELE
GLQALTDLLLTQNLLEVVPDSIGCLKQLSILKVDQNRLTHLTDSIGECENLTELVLTENL
LQTLPRSLGKLKKLTNLNVDRNRLGAAPKELGGCASLNVLSLRDNRLAKLPAELADATEL
HVLDVAGNRLQNLPFALTNLNLKAMWLAENQSQPMLKFQTEDDERTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWTDSNLNRVSVIQFQEETKAEDEDDEAAAERRGLQRRATPHPSEL
KVMKKVIEDRRNEVFGSRPEREDHSADGQEKRLSDLSNQSHDSQVSDSTLSATSHEERRD
AAVPSQREDLVDGHSHHEDEELDDMEVEYIEPTVHFAEEPIIRSDDAEEDGERSDEDDDR
PPFPAEKQRLIRKDTPHYKKHFKITKLPKPETVVALLQGFNPDGLGLDERDGHEEDEEDE
GVGTPRLTRRMETSELQDSRYHVNSSQVKGVSFDQVNNLLIEPARIEEEEYTLTIQRQTG
GLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVKVGDKLLEVNGVDLHEAEHHTA
VEALRSSGAAVSMTVLRERMVEPENAITTTPLRPEDDYFPRERRSGSGLGEGGHGQGAGY
GPLQRLSACLVRNDRGLGFSIAGGKGSTPYRTGDMGIYISRIAEGGAAHRDSTLRIGDRV
ISINGVDMTEARHDQAVALLTGTSPTIALLVERDPNAPRSPGLSRQRPHSPPPPEPSDSP
DQEEDGLQGNHLGRVEDEYPIEEVTLVKSGGPLGLSIVGGSDHASHPFGINEPGVFISKV
IPHGLACQSGLRVGDRILEVNAIDLRHATHQEAVRALLSNKQEIRMVVRRDPSPPGMQEV
VIHKQPGEKLGISIRGGAKGHAGNPFDSTDEGIFISKVSSSGAAARDSRLQVGMRILEVN
NHSLLGMTHTEAVRVLRAVGDSLVMLVCEGFDPRKVSAAEAVPNQEPYASPGIIANPFAS
GIVRKNSMESISSIDRDLSPEEVDIMLKESEMVRETSEWEKEEMEKVERMRLEREEATRL
LEEETENIGTGPLKLDYKTLAALPTTSLQKINRFSPSLNPTVPMEAPLKAHYGAPLEPLG
YSLSHPPNPHVEPTSSPSLFSSKEDSVGSTAILNLSEEGEESLVDSQPICFKENPFLVAN
RKGKGLPPGQQILSGPPVGYGKPGQLQTRLFSKTPSSDYARTESPIRETSYSPTLQPPSH
HSSDSSLCSGRETRFASIHFTSTPNTKDNTSPSTRPGAILPVGRMRPSTSPATPDGAGLS
PFQHGPSPFNSQSSPRGPSPTSHYELPMNAKQVYKAFAAVPRSLAVQEPEQDLYGVRNHF
HPKQPSPEPESNNDVFEEGDSGSVKAAARSALSPDRWEYTNMAAVPRISRPSLDTQSPSP
SGKDSPEQRSFRDRQKYFEIDVKQQTPEKPKPRISLVGEDDLKKMREEEERKFEQRAREY
LLDEEDEDDEEDLAKHVAQMKATGKVLLDGVEYDVEPVLRPSYGASSRPSSVESKGDTAR
NSLDDSFRLAQRPNSMTGLTHAYTSDSSAAAPIRTAKAERRHQERLRMQSPELAVAVDKD
LSPAEKRALEAEKRAMWRAARPLDLEDDVRHYEQDLAKRLYQARVRASDSTSAAASQLRS
ASGRMKSLEQDALKAQMVIAKSRDGKKRSTLDQLAESPSPAPTPSPAPTPSPTPMEELTS
PRMLTSPGRLSLSSKRFDYRQFAAIPSSKPASDIQSPDAVDDVQFTDDDSQHPDPTAGPE
AEVPVPVTSALEEMALYSNKRKLRQGRRSLETAVPT
NT seq
6051 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtgtatcccgctgtggcgatgcaaccgccacgtcgagtcggtggacaagcgg
cactgcaacctgcaggcggtccccgacgaagtgttccgatacagccgaagtctggaagag
cttctgctggatgccaaccaactcaaggagctgcccaagcctttcttccgactactgaac
ctccggaaactgggcctgagcgacaatgaaatccagagactgccccccgaagtggccaac
ttcatgcagctggtggagctggacatatcccgaaatgacattcccgagatccccgagagc
atcaagttttgtcgggccttggagatcgccgacttcagcggaaaccccctctccagattg
ccggatggtttcactcagctgcgagcgctggctcacttggcgctcaacgaggtgtcgctg
cagactctgcccggcgacatcggaaatctggccaacctggtgacgctggagctgagggag
aacctcctcaagtgtcttcccacgtcgctgtccttcctggtgaaactggaacagctggac
ctgggcagcaacgaactggaagtgttgccggacacgctcggcgcactgcccaacttgagg
gagctttggctcgaccggaaccagttgtcctcgttaccaccagagctgggcaacctccgc
agacttgtgtgtctggatgtgtccgagaatcgcctggaggagcttccctctgagctcgaa
ggcctccaggccctcaccgacctgcttctcacgcagaacctgctggaggtggttccggat
agcataggttgtctgaagcaactgtccatcctcaaggtggaccagaacagactgacccac
ctgactgactccatcggagagtgtgaaaacctgacagagctggttctgaccgagaacctc
ctccagacgcttcctcgctcgctggggaagctgaagaagttgaccaacttgaatgtggac
cgcaaccgcctgggtgccgcgcccaaagagttgggcggctgcgccagcctcaatgttctc
tcactgcgggacaaccgtctggccaagctgccggctgagctcgccgacgccactgagctg
cacgtgctcgacgtggctgggaatagattacaaaacctgccttttgccttgaccaacctc
aatctgaaggctatgtggctggcagagaaccagtcgcagccaatgctcaagttccaaaca
gaggatgacgagcgcacgggggagaaagtgttgacttgctacttgctgccccagcagcct
tcccccagcctcgagaacctgctgcaaaacagtgtggacgacagctggacggacagcaac
ctgaacagagtgtcggtcattcagttccaggaagaaaccaaggccgaagacgaggacgac
gaggccgccgccgagcgcaggggccttcagcgtcgagccacacctcatcccagcgaactc
aaggtgatgaaaaaagtcattgaggaccgacgcaatgaagtgtttgggtccaggcccgaa
agagaagatcactccgccgacggacaggaaaaacgtctcagcgacctctccaatcagagc
cacgactcgcaggtgtccgacagcacgctgtcggccacctcccacgaggagaggcgagac
gccgccgtgccctcccaaagggaggaccttgtggacggacactctcatcatgaggacgaa
gaactggatgacatggaggtggagtatattgagcccactgtgcactttgccgaggagccc
attatccgcagtgacgacgccgaggaagacggcgagaggagcgacgaggacgacgacagg
ccacccttcccggccgagaagcagcggctcatccggaaggacacgccgcactacaagaag
cacttcaagatcaccaagctgcccaaacctgagacggtggtggccctgctgcagggcttc
aaccccgacggcctcggcttggacgagcgggacgggcacgaggaggatgaggaagacgag
ggcgtcggcacccctcgcttaactcgcaggatggagacttcggagctgcaagacagccga
tatcatgtcaactccagtcaagtcaagggggtgtcatttgatcaagtcaataatctgctg
attgaacctgctcgaattgaggaggaagagtacaccttaaccatccaacggcaaacgggc
ggcctcggcatcagcatcgccggcgggaaaggctccacgccatacaagggggacgacgag
gggatctttatctccagagtttcggaggaaggtcctgcggccagagcaggagtcaaagtg
ggagacaagttgctagaggtgaacggcgtggacctgcacgaggctgagcaccacacggcc
gtggaggccctgcgtagctctggcgccgccgtctccatgactgtgcttcgtgagcgcatg
gtggagccggagaacgccatcaccaccacgccgctccggcccgaggacgactatttccca
cgggagaggcgcagtggcagcgggctgggtgagggcggccacggacagggggccgggtac
ggacctctgcagcgcctctccgcctgcctggtgcgcaatgacagggggctgggcttcagc
atcgccggcgggaagggctccacgccataccgcactggagacatggggatctacatttct
cgcattgcggaggggggagcagcccaccgagacagcacgctacggataggcgacagggtc
atctctatcaatggtgtagacatgacagaggccagacatgaccaggcagtagcgctcctt
accggcacctcacccactatcgccctcctggtggagcgagaccccaacgcgccgcgctct
ccgggcctgtcccgtcagcggccccactccccgccgcccccagagccctctgactctccg
gaccaggaggaagacggcctacaagggaaccacctaggccgcgtggaggatgagtacccc
attgaggaagtgacgttggtcaagtcaggcggtcccctcggcctgagcatcgtcgggggc
agcgaccacgccagccaccccttcggcatcaacgaacccggcgtgttcatctcaaaggtg
atcccccacggcttggcgtgccaaagcggcttgcgcgtgggagaccgcatcctggaggtg
aacgccatcgacctgcgccacgccacccaccaggaggccgtgcgggcgctgctgtccaac
aagcaggagatccgcatggtggtgcgcagagatccctcgccgccagggatgcaggaagtt
gtcatccataagcagccgggggagaaactggggatcagtatacgcggaggagctaaaggc
catgcgggaaatccttttgactccactgatgagggcatcttcatatccaaggtgagctcc
agcggcgcggccgcccgggacagccggctgcaggtgggcatgcgcatcctggaggtgaac
aaccatagcctgctgggcatgacacacacggaggccgtgcgagtgctgcgggccgtgggc
gactcgctggtcatgctggtgtgcgaaggcttcgacccgcgcaaagtgtccgccgccgag
gctgttcccaaccaggagccttatgcgtctcccggcatcatcgccaacccttttgcgtca
ggcatcgtccgcaagaacagtatggagagcatctcttctatagaccgagacctgagccct
gaggaggtggacatcatgctaaaggagtctgagatggtgagggagacgtccgagtgggag
aaggaagagatggagaaagtggagcgtatgcgtttggagcgagaagaggcaactcgcctg
cttgaagaagagaccgagaatatcggcactggacctttaaaactggactacaaaacgctg
gcagcgctacccaccactagcctacagaagatcaacagattctctccttctctaaatcca
accgtccccatggaggcccccttgaaagcccactacggcgccccgttagagcctctgggc
tacagcttaagccaccccccaaacccccacgtggagccaacatcctcccccagtttgttc
tcctccaaagaagacagcgtcggctcgacggcgattctgaatttatcagaggaaggcgag
gagtctctggtggactcgcagcccatctgcttcaaggagaatccctttttagtggccaac
cgcaaaggcaaaggtctgccacctggccagcaaatcctttcgggaccgccggtgggctac
gggaagccaggccaacttcagactcggttgttcagcaagactccttcgtctgattacgcc
aggaccgagagtccaatcagagaaacctcctactcgccgaccctccagccgcccagccac
cactcttccgacagctccctgtgttctggcagggagacccgcttcgcaagcattcatttc
acctccacccccaacaccaaggacaacacttcaccctctactcgaccgggcgccatcctg
cctgtcgggcgcatgcggcccagcacctcaccggccactccggacggcgccggcctcagc
cccttccagcatggcccctcccctttcaactctcaatcctctcctcgcggtccctccccc
acctcgcactacgagttgcccatgaacgccaagcaggtgtacaaggcgtttgccgccgtg
cctcgctcgctggcggtgcaagagccggagcaggacttgtatggtgtgaggaaccatttc
catcccaagcagccttctccagagcccgagtcgaacaacgacgtgtttgaggagggggac
agtgggtccgtcaaagcggcggcccggtccgccctctcgcccgaccgttgggagtatacc
aatatggccgccgtgcctcgcatctccaggccgtccctggacacgcagagtccgtcaccc
agcggcaaggacagccccgagcagcggtccttccgggaccggcagaagtactttgagatc
gacgtgaagcagcagacacccgaaaagcccaaacctcgcatctcgctcgtcggggaggac
gacctcaagaagatgagggaggaagaagagcgtaaatttgaacagcgagcgcgcgagtac
ctgctagacgaagaggacgaggacgacgaggaggacctggccaagcacgtggcgcagatg
aaggcgacgggcaaggtgctgctggatggagttgagtacgacgtggagcccgtgttgcgg
ccaagctacggcgcaagttcacggccttcgtcagtggaaagcaaaggagacacggcgaga
aattccttggatgacagcttcagactggcgcagcgtcccaattccatgactggtttgacc
catgcgtacaccagtgactcgtcggcggcggctcccattcgcactgccaaagccgagcgc
cggcaccaggagaggctccgcatgcagagtccggagctggccgtggccgtggacaaggac
ctctcccctgccgagaagcgagccctggaggccgagaaaagagccatgtggagagcggca
cggcctttagacttggaggacgatgttaggcactatgagcaggacctggccaagaggctc
taccaggctcgagtgagggcctctgacagcacatcagccgctgcctcccagctcaggtct
gccagcgggaggatgaagtctctggagcaggatgcgctcaaagctcagatggtcatcgcc
aagtctcgggacggcaagaaacgaagcaccctggaccagctggctgagtcgccttcgccg
gcgcccacaccctcaccggcgcccacgccctcacccaccccgatggaagagctcaccagt
cctcggatgctaacctctccgggcagactgtccctgtcatcaaagagatttgactaccgc
cagtttgctgccattccctcttccaaaccagcatccgacatccagtctcctgacgcggtg
gacgatgtgcagttcaccgacgacgactcgcagcatccggatcccaccgctggcccggag
gccgaggtcccggtgcccgtcacctcggccctcgaggagatggcgctgtacagcaacaaa
cgcaagctgcgacaagggcgccgcagtttggagacggccgtgcccacataa
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