KEGG   Syngnathus scovelli (Gulf pipefish): 125986061
Entry
125986061         CDS       T08785                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60 isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125986061
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sscv03041]
    125986061
Spliceosome [BR:sscv03041]
 Complex A
  U2 snRNP components
   U2 related factors
    125986061
 Complex B
    125986061
SSDB
Motif
Pfam: RRM_1 RRM_7 DUF1543
Other DBs
NCBI-GeneID: 125986061
NCBI-ProteinID: XP_049605396
LinkDB
Position
18:4945366..4952391
AA seq 533 aa
MTMENGQGTGSKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMA
AVTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMS
WDSVTMKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEE
ARAFNRIYVASVHPDLSDDDIKSVFEAFGRIKSCTLARDPTSGRHRGFGFIEYEKPQSAV
DAVSSMNLFDLGGQYLRVGKAVTPPMPMLTPTTPGGLPPAAAVAAAAATAKITAQASMNP
FYRDLMAFQEAVAGASVLGALAAPQLLSQQMGIPQAVMAAQAPGVITGVTPVRPPIPVLP
QVGLVNPVLASPPVLSSQVLAAAVAGQLQEKKEEKEEALQDGTGQEMLSDQEHMSISGSS
ARHMVMQKLLRKSESTVMVLRNMVGPEDIDDALEGEVTEECGKFGSVNRVIIYQEKQGEE
EDADIIVKIFVEFSMASEMNKAIQALNDRWFGGRKVVAEVYDQDRFNSSDLSA
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgacgatggagaatggacagggcacaggctctaagcttggcctgcccccgctcaccccg
gaacagcaggaggcgctgcagcgggcaaagaagtatgccatggagcagagcattaagagt
gtgttggtgaagcagaccattgcccatcagcagcagcagctcaccaatctgcagatggca
gcagtgactatgggctttggagatcctctctcacctttacaatcggtggcagctcagcga
cagcgcgctctcgccatcatgtgccgggtgtacgtaggctccatttactatgagctgggg
gaggacaccatcagacaggcctttgctcccttcggccccatcaagagcattgacatgtct
tgggactcggtgacaatgaagcacaagggctttgcctttgtggagtacgacgtgccagag
gctgcccagctggctctggagcagatgaattccgtcatgttgggtgggcgaaacattaag
gttgggcggccaagtaacatcggtcaggcgcaacccatcattgaccagctggcagaggaa
gcgcgcgcttttaaccgcatctacgtggcctcggtgcaccccgacctgtcggacgatgac
atcaaaagtgtttttgaggcttttggaaggatcaaatcgtgtacattagcccgagacccc
acctccggacggcacagaggcttcggcttcatcgagtacgaaaagccgcagtcggccgtg
gacgctgtgtcttctatgaacctgtttgatctggggggtcagtacctgcgggtgggcaag
gcggtcactcctcccatgcccatgctcacccccaccactcccggtggcctcccaccggcg
gcggcggtggctgcagcggcggccactgccaagattacggcccaggcaagtatgaatccc
ttctacagggatttaatggccttccaggaggccgtagccggcgcgtcagtcctgggggcg
ttagctgcgcctcagctccttagtcagcaaatgggaataccgcaggccgtcatggctgca
caggcgcccggtgtcatcacaggagtgactccggtgcgtcctcccatcccggtgctcccc
caggtgggcctagtgaaccccgtgctggcgtcgccgcccgttctctccagtcaggtgctg
gcagctgccgttgctggccagctgcaggagaagaaggaggagaaagaagaggcgctccag
gacggcacgggccaggagatgctgagcgaccaggagcacatgagcatctcgggcagcagc
gccagacacatggtcatgcagaagctgcttcgaaagtcagagtccacagtaatggtcctg
cgcaacatggtgggcccggaagacatagacgatgccctggagggcgaggtgacagaagag
tgcggcaagttcggctcggtcaaccgcgtcatcatctaccaggagaagcagggtgaggag
gaggacgccgacatcatcgtcaagatcttcgtagagttctccatggcctcggagatgaac
aaagccatccaggcgctcaacgaccgctggtttggcggacgcaaggtggtcgccgaggtg
tacgaccaagaccgcttcaacagcagcgatctgtctgcgtga

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