Syngnathus scovelli (Gulf pipefish): 125986080
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Entry
125986080 CDS
T08785
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125986080
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sscv01007
]
125986080
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sscv03016
]
125986080
03029 Mitochondrial biogenesis [BR:
sscv03029
]
125986080
Enzymes [BR:
sscv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
125986080
Amino acid related enzymes [BR:
sscv01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
125986080
Transfer RNA biogenesis [BR:
sscv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125986080
Mitochondrial biogenesis [BR:
sscv03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
125986080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
DUF5915
OS-D
DUF3993
Motif
Other DBs
NCBI-GeneID:
125986080
NCBI-ProteinID:
XP_049605448
LinkDB
All DBs
Position
18:9432365..9436980
Genome browser
AA seq
749 aa
AA seq
DB search
MLVLLRRAAASALLRTTPDIPSLCSVLQVRCVWFDRLQNRPFSTSAPLFTKKKKSLWQQR
LEGRTMDGDMEQILAPLRLAVKEQGDLVRQMKQDGAPDVDVTKAVAELKARKRNLEAKEL
ALQPKDDIVDRTKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQAWRQHFI
QEEQILEIDCTMLTPEPVLKTSGHVDKFADYMVKDVKNGECFRADHLLKAHLQKMMADKK
CTAEKKAEMEDVITQMDNYTQQELTDLFVKYNVKSPTTGNDLTAPISFNLMFQTSIGPGG
NMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAE
IEHFVDPSEKVHPKFSNVADLDILLYSSKAQTSGQSAHIMRLGDAVEQGVINNSVLGYFI
GRIYLYLTKVGIAKDKLRFRQHMDNEMAHYACDCWDAETKTSYGWIEIVGCADRSCFDLK
CHAQATKVPLVAEKPLKEPKVVNVVQFEPNKGVIGKAYKKDAKMVMDHLATCDECSIAEK
EQLLNENGEFTIEVGGKTFQLTKDMVAIRRFQKTLHVEEVIPNVIEPSFGIGRIMYTIFE
HTFHVREGDEQRTFFSFPATVAPYKCSVLPLSQNQDFVPFVKELSEAMTRYGVSHKVDDS
AGSIGRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPVIIRDLA
NGTLTWAEVETKYPIFEGQETSKRDAVEE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgctggttcttctccgcagggctgctgcatcggcgctgctgaggaccacccccgacatt
ccctccctctgctcggtgctacaggtccggtgtgtttggtttgatcgccttcagaaccgg
cccttttccacgtcagcgccccttttcactaagaagaagaagagcctgtggcagcagcgg
ctggaaggacgaacaatggacggcgacatggagcaaatccttgcccccttgaggcttgca
gtcaaggaacagggcgatctggtgcggcaaatgaagcaggatggagctcctgatgtggac
gttaccaaagcggtggctgaactcaaagcaaggaagcggaatttggaggccaaggagctg
gcgttgcaacccaaagatgacattgtggacagaacaaagatggaggacactctgaagagg
cgtttcttctacgaccaggctttcgccatctatggcggtgtgagcggcctgtacgacttt
ggtccggtgggctgcgccttgaagaacaacatcctgcaggcgtggaggcagcactttatt
caggaagagcagatcttggagatcgactgcaccatgctcacccccgagcctgtccttaag
acatcaggacacgtcgataagtttgctgactacatggtgaaagatgtcaagaatggcgag
tgcttcagggcggaccatcttctcaaagctcacctccagaagatgatggctgacaagaaa
tgtactgctgagaagaaggccgagatggaggatgtcattacgcagatggacaactacacc
cagcaagagctgaccgaccttttcgtcaagtacaacgtcaagtcccctaccacaggaaat
gacctcacagctcccatctccttcaacctcatgttccagacctccatcggaccaggaggg
aacatgccaggctatctgaggcctgaaaccgctcagggaatcttcctcaatttcaagcga
ctgttggagttcaaccaaggaaagctccctttcgctgctgctcagattggaaactccttc
aggaatgaaatctcgcctcgctccggactcatccgcgtcagagagttcaccatggctgag
atcgagcactttgtggaccccagtgagaaagtccaccccaagttttcaaacgtagccgac
ctggatatcctgttgtactcctccaaggctcaaaccagcggccagtctgcacacatcatg
aggctcggcgatgctgtggagcagggtgtgatcaataactccgtcctgggatatttcatc
ggtaggatctacctctatctcacgaaagtcggaatagccaaagacaagcttcgcttccgc
cagcacatggacaacgagatggcccactacgcgtgcgactgctgggatgccgaaaccaaa
acctcctacggttggatcgagatcgtggggtgcgccgaccgctcctgctttgacctgaaa
tgccacgcccaagccaccaaggtgcccctggtggcagaaaagccacttaaagaacccaaa
gttgtgaacgtcgtccagtttgagccaaacaaaggagtcatcggcaaggcgtacaagaag
gacgccaagatggttatggaccacctggccacgtgcgacgaatgctccattgccgaaaag
gagcagctcctcaacgagaacggagagttcaccatcgaggtggggggaaagacgttccaa
ctgaccaaagacatggtggctatcaggcgatttcagaagacgctacatgtggaagaagta
attcccaatgtcattgagccatcgtttggtatcggaaggatcatgtacaccatctttgag
cacaccttccacgtccgggagggtgacgagcaaaggacgttcttcagcttcccagcaacc
gttgctccatacaagtgctctgttttaccactcagtcaaaaccaggattttgtgcctttt
gttaaagaactctccgaggccatgaccagatacggcgtgtcccataaggtggatgactct
gcagggtccatcgggaggcgctacgcccggacagacgaaattggcgtggcgtttggcatc
accatcgactttgacaccgtcaacaagacgccacacaccgccaccctgagggacagagac
tcaatgaggcaaatccgagccgaggtgagcgagctgcccgtgatcattcgggatttggct
aacggcactctaacctgggcagaagtggagaccaagtatcccatcttcgaaggacaggag
accagcaagagggacgcggtggaggaatga
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