Syngnathus scovelli (Gulf pipefish): 125986084
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Entry
125986084 CDS
T08785
Symbol
ctdspla
Name
(RefSeq) CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a isoform X1
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125986084 (ctdspla)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125986084 (ctdspla)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125986084 (ctdspla)
Protein phosphatases and associated proteins [BR:
sscv01009
]
HAD phosphatases
Fcp/Scp phosphatases
125986084 (ctdspla)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125986084 (ctdspla)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
125986084
NCBI-ProteinID:
XP_049605453
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All DBs
Position
18:complement(9417712..9430718)
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AA seq
279 aa
AA seq
DB search
MDNTSIITQVANPKEEESICASQDKVSQSNSSLKKHRSRSIFSPFFCCFRNYNDYQVEPP
AVNNKTHALPPPPEENGAPPKCDQVQADHIPSPPAKFLLPEVSIADYGRNCVVIDLDETL
VHSSFKPISNADFIVPVEIDGTVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADP
VADLLDRWGVFRARLFRESCVFHRGNYVKDLSRLGRELGKVIIVDNSPASYIFHPENAVP
VQSWFDDMADRELLELLPIFEGLSKEDDVYSLLQSLRER
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggacaacacgtccattataacacaggttgcaaatcccaaagaggaggaaagcatttgc
gcgagtcaagacaaagtgtcccagtccaacagcagcctcaagaaacaccgcagtcggagc
attttcagccccttcttctgctgctttcgcaactacaatgactaccaggtggaaccgccg
gccgtcaacaacaagactcatgccctgccgccgcctcccgaggagaacggcgctcctccc
aagtgtgaccaggtgcaggctgaccacatccccagtcccccagccaagttcctcttgccc
gaggtcagtatagcagactatggcaggaactgcgtggtgatcgacctggacgagacgctc
gttcacagctccttcaagcctattagcaatgcagacttcatcgttccggtggagattgat
ggaactgttcatcaggtgtatgtgctgaaaaggcctcacgtggacgagttcctgcaaagg
atgggggagctgtttgaatgtgtccttttcaccgccagtttagctaagtacgcggacccc
gtggcagacctcctggaccgctggggagtgttccgtgctcgtctcttcagggaatcctgt
gtgttccacagaggaaactacgtcaaagacctcagccggctgggccgagagctcggcaaa
gtcatcattgtcgacaactcgcctgcctcctacatcttccaccctgagaacgccgtgccg
gtgcagtcgtggttcgacgacatggccgacagggaactcttggagctgctgcccatcttc
gaaggcctcagcaaggaggacgacgtttacagcctcttacagagcctgagggagaggtag
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