Syngnathus scovelli (Gulf pipefish): 125986123
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Entry
125986123 CDS
T08785
Symbol
stx3b
Name
(RefSeq) syntaxin 3b isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
125986123 (stx3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125986123 (stx3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125986123 (stx3b)
Membrane trafficking [BR:
sscv04131
]
SNARE
Syntaxin (Qa)
Stx-PM
125986123 (stx3b)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
125986123 (stx3b)
Exosomal proteins of other body fluids (saliva and urine)
125986123 (stx3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
PI_PP_C
FlaC_arch
YtxH
HXXEE
DUF6827
Seryl_tRNA_N
FUSC
Relaxase_C
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
125986123
NCBI-ProteinID:
XP_049605512
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All DBs
Position
1:13217071..13231561
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AA seq
333 aa
AA seq
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MKDRLEQLRATCNQDDDEVEIAMDNAAFMDDFFSQIEDIRNSIDKIDENVAEVKKLFSVI
LSAPTSDQKTQDDLEAITNDIKKMANNARNKLKTIERNLESEEQERVSADVRIRKSQHAV
LSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKATTDEELEEMLESGNAAVFTAGIV
DSGISKQALSEIEARHKDIVRLESSIKELHDMFVDIAMLVESQGDIVDNIEQNVSKSVDH
IMVAKEQTKKALRYQSKARKVMLSSQLIISFPFWSLFFLISLTACFLWPIHIHTGQAIHR
GYNPFMTTCPLLRCVLIMHELIHNCSGNHERGG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgattggaacaactgagagcgacatgcaatcaagatgacgatgaagtggag
attgcaatggacaatgcggcctttatggatgacttcttctcccagattgaggacatcagg
aacagcatcgacaaaattgacgagaatgtggcggaggtcaaaaagctgttctctgttatt
ctgtctgctccaacatcagatcaaaaaacacaggatgacttggaggcaatcaccaacgac
atcaagaaaatggcaaacaatgctagaaacaaactcaagaccatcgagaggaatctggag
tcagaagaacaggagagggtgtcagctgacgtgcggatacgtaaatcacagcatgcagtg
ttgtctaggaagtttgtggaggtcatgactaagtataatgaagctcaggtggacttcagg
gagaggagtaaaggacgtattcagagacagttggagatcaccgggaaggcgacaacggat
gaagaacttgaggagatgttggagagcggcaatgctgcggtgtttactgcagggattgtt
gactctgggatttccaaacaagctttgagtgagatagaagcccgccacaaagacatagtt
cgtctggaaagtagcatcaaggagctgcacgacatgtttgtagacatcgccatgctggtg
gagagccagggtgacatagtagacaacatagagcagaatgtttccaagtcagtggaccac
atcatggttgctaaagagcagaccaaaaaggctctaaggtaccagagtaaagcacgcaag
gtaatgttgtccagccaactgataatcagtttccccttctggtctttgtttttcctcatt
tctctgactgcttgctttttgtggcccatacacatacacacaggccaagccattcatcgt
ggttacaatccattcatgacaacatgccccctgttacgttgtgtgttaattatgcatgaa
ttaatccataattgctctgggaaccacgaaagggggggatga
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