Syngnathus scovelli (Gulf pipefish): 125986163
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Entry
125986163 CDS
T08785
Symbol
tlr22
Name
(RefSeq) toll-like receptor 22
KO
K18808
toll-like receptor 13
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sscv04054
]
125986163 (tlr22)
Pattern recognition receptors [BR:
sscv04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
125986163 (tlr22)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
LRR_9
TIR_2
LRR_14
LRR_NXF1-5
LRR_At5g56370
LRRNT
Motif
Other DBs
NCBI-GeneID:
125986163
NCBI-ProteinID:
XP_049605597
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Position
18:7274586..7279184
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AA seq
948 aa
AA seq
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MDDGNDPISGRFSWLSFCFVFSLSANCCAGYILKDCRISYDNAICSGSKLRTVPRDIPAW
IKTFDLGGNKISKLRAGDFLNYTLLTQLDLKRNNISQIEKGTFANLRLLQMLNLNNNRLA
QLGDVFEGLSNLSELRLTSNVIRTVAPSSFKPLTNLTVLDLSFNKLRRLTQVHYAIQHLP
NLKYLILKKIDVTIFQSWELTNNTVGFAYLDLSQNHIDVFAVSANVFQNLTWLNVGGSPR
RRKFSWEIGRGPLLGQLTSLDIGGLHLTQKDAGVLFQSVNFSLSTLRMNAMKSDIRQLLD
VSCTIPTLTQLQLRRNKLRLLDGGLLRLCSNVTELDLADNRMKDVLNGSFGALKDLKKLT
LSQNNLSSVPPAVRNLSRLLELDLSSNNISTLTCEDFADLGKLRILGLYQNSISTLHQCV
FKGLAKLEVLKLQTNRITQLASAFKRYLPNLRQLKLDNNQIKVIEMGAFEGLRSLQNLSL
QRNRLGKLENGSFVGLTMLTDLLLQSNEIQQITAGVFNDLTNLRRLSLLDNRIKYKSSLP
LPAAPFSGLSRLETLAMAGQHSRGRSQLPCNFLQGLTNLQIFDTRNVLLASLHPDTFKHT
PELQKLDMSSNELIDISPSLFEPIQNLRSLYISRTALRSLDFLKEANLTKLKFLQARRNQ
YSVITKEQMDALPSLVYLDLQGNSFLCDCDNSQFLLWLNKSQTQVFDAYNFVCNYPPSVK
GMKLLDLDIRSCSVDVEFIYFISTTVAVLLFQLSSFTYHFLRWQLAYAYHLFLALLHERK
FRDRQPESLYDAFVSYNAGDEDWVFRELVPKLEEEQGWKLCLHHRDFEPGKPIMENITDA
IYASRKSICIISRKYLQSEWCSREIQVAGFRLFDEHRDVLILIFLEDIPIWELSPYYRMR
KLVKKQTFLSWPRAAQCTDLFWEKLRQALHSGNNPGGELLLLTVESRK
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggatgatggtaatgaccccataagtggacggttctcgtggttgagcttttgtttcgtt
ttttctctgagcgccaactgttgcgccggatacatactgaaggactgtcgaataagctac
gacaacgccatctgctcgggcagcaagctacgaaccgtcccccgggacatcccggcatgg
atcaaaacctttgacttgggcgggaataaaatctccaagctccgagcaggtgatttcctc
aattacacgctcctgacgcagttagacctgaagcgcaataacatttcacagatcgaaaaa
ggcacctttgccaacctgcgcttgctgcaaatgttaaatctgaataataaccgtctggca
caactgggagatgtgtttgagggtttgagcaacctgagcgagctgagactaacgagcaac
gtcataagaactgtggccccttcctccttcaagcccctgacaaacttgacagtcttggac
ttgtcattcaacaaactgcggcgcttgactcaggtccactacgcaatacagcatctaccc
aatctgaagtatctcatcctcaaaaaaatcgacgtcaccattttccagtcctgggaactg
accaacaacaccgtgggcttcgcgtacctcgatctgtctcagaaccatatcgacgtcttt
gccgtcagcgccaacgttttccaaaacctgacctggctgaacgtggggggttctccgaga
aggcgcaagttttcgtgggagattggccgagggcctcttctcggacagctgacctcgctc
gatatcggcgggcttcacttgacgcagaaggacgccggggtgcttttccagagcgtcaac
ttctcgctgagcactctacggatgaacgccatgaaatccgacatcaggcagctgctggac
gtgtcctgcaccatcccgacactgactcagttgcaactcagacgcaacaagcttcggctg
cttgatggcggtctgcttcggctctgctccaacgtcaccgagttggatttggccgacaat
cgtatgaaagacgttctcaacggctcctttggagccctaaaagatctgaagaagttgact
ctcagtcagaacaatctctcctcagtcccgcccgccgttaggaatctgtccagacttcta
gaactggacctgagctccaataacatcagcacgctcacttgcgaagacttcgccgatctc
ggcaaactccgaatccttggcctttatcagaactccatatcgaccctccaccagtgcgtc
ttcaaaggtctagccaagcttgaggtcctcaaattgcagaccaatcgaatcactcaactg
gccagtgcatttaaaagatacttaccgaatcttagacagctgaaactagataataatcaa
atcaaggttatcgaaatgggagcatttgaaggcttgcgatctctccagaacttatcgttg
cagaggaatcgactgggaaagcttgagaacggctctttcgtgggcctgacgatgctcacc
gaccttttgctgcaatccaacgagatccaacagataaccgcgggcgttttcaatgatctg
accaatttaagacggttaagtctgttggacaatcgcatcaagtacaagagcagtttgccg
ttgccggcggcgccgttctctgggctttctcgcctggagaccttggccatggcgggccaa
catagcagaggcaggtcccaactgccctgcaactttctgcagggtttgaccaaccttcag
attttcgacacgagaaacgtcttactcgcttccttgcacccagacacgttcaagcacaca
cctgagcttcagaagcttgacatgagctcaaatgagttaatcgatatctcccctagcttg
tttgagcccatccagaacctgcgcagcctctacatttcaagaaccgctctccggtcgctc
gatttcctgaaggaggccaaccttaccaaactcaagttcctccaagcacgaaggaaccag
tattcggtcatcaccaaggaacagatggacgcccttccttccctggtgtatttggacctt
caggggaacagttttctatgcgattgcgacaactcccagttcctgctgtggttgaacaaa
agtcaaacccaagtctttgacgcctacaactttgtatgcaactaccccccgagcgttaaa
ggcatgaagctgctggacctcgacatccgatcctgctcggtggatgtagagttcatctac
ttcatctccaccaccgtggccgtactcttgtttcagttgtcgtcctttacctatcacttc
ctgcggtggcagctggcctacgcctatcacctcttcctggccttgctgcacgagcggaaa
ttccgcgacagacagcccgagtcgctctacgacgccttcgtctcttacaatgccggcgac
gaggactgggtattcagggagctggtgcccaaacttgaggaggagcaaggctggaagttg
tgcttgcaccacagagacttcgagccagggaagcccatcatggagaacatcaccgacgcc
atctatgccagcagaaaatccatctgcataatcagtcgcaaatacttgcagagcgagtgg
tgctccagagagattcaggtggccggcttccgcctgtttgatgagcacagggatgttctc
atcctgatcttcctggaggacattcccatctgggagctgtctccttactaccgcatgagg
aagcttgtgaaaaagcagaccttcctgagttggcctcgggcagcccagtgcaccgacctc
ttctgggagaagctccggcaggctctgcactccggaaacaatcccggcggggaactgcta
ctgctcaccgtggagagcagaaagtga
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