Syngnathus scovelli (Gulf pipefish): 125986169
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Entry
125986169 CDS
T08785
Symbol
tmtopsb
Name
(RefSeq) teleost multiple tissue opsin b
KO
K04256
c-opsin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125986169 (tmtopsb)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sscv04030
]
125986169 (tmtopsb)
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125986169 (tmtopsb)
G protein-coupled receptors [BR:
sscv04030
]
Rhodopsin family
Vision
Opsin
125986169 (tmtopsb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srv
7TM_GPCR_Srx
7tm_4
7TM_GPCR_Srh
TAS2R
7TM_GPCR_Srw
MP_p6
DUF3099
DUF2189
Motif
Other DBs
NCBI-GeneID:
125986169
NCBI-ProteinID:
XP_049605612
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All DBs
Position
18:7316342..7320382
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AA seq
401 aa
AA seq
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MIDCDVSLSYAHCPEGGGAVAASAAAAPTAKYEEVSGSPPSLSPTGHLVVAVCLGSIGTL
GLVCNSVVLALFLRYRALRTPMNLMLVSISLSDLLVSVLGTPFSFAASIHGRWLIGRAGC
VWYGFINACLGIVSLVSLAVLSYQRYRTMTAPNAADGRDFRPALTGICFSWFYSVAWTLP
PLLGWSRYGPEGPGTTCSVDWRSRTANNVSYVVCLFAFCLVLPFGVIVFSYGKLLLAITQ
ARSTSSVATRRRERRVLVMVVTMVLCFLLCWLPYGVVALMATFGPGEPPGPEASIMPSLL
AKSSAVVNPFIYIFMNKQFHRCFRAFFRCSAVEGGPTFSMVTKTLRSVQPDLRDRHVSTA
APSSAHTSPPSVRRSSEADDRPPSLSDRPRPRLALVAHYRQ
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgatcgactgcgacgtgagcctgagctacgcgcactgccctgagggtggaggcgccgtc
gctgcctccgctgccgccgcccccacggccaagtacgaagaggtatccggctcgccgccg
tcgctcagcccgacgggtcacctcgtggtggccgtgtgcctgggctcgatcggcacgctt
ggcttggtgtgcaactcggtggtgctggccctgttcttgcgctaccgggctctgcgcacg
cccatgaacttgatgctggtcagcatctcgctcagtgacctgctggtcagtgtactcggg
acccccttcagcttcgccgccagcatccacggacgatggctcatcgggcgcgcgggttgc
gtgtggtatggcttcatcaacgcctgcctgggcatcgtgtcgctggtctcgctggccgtt
ctgtcgtaccagcgctaccgcaccatgacggcgcctaacgcggccgatgggcgcgacttc
cgtccggcgctgaccggcatctgcttctcctggttctactcggtggcctggacactgccg
cccttgctgggctggagccgctacgggcccgagggtcccggcaccacctgctcggtggat
tggcgctcgcggacggccaacaacgtctcctacgtggtatgcctgttcgccttctgcctg
gtgctgcccttcggcgtcatcgtcttctcctacggcaagctgctgctcgccatcacgcag
gcacgcagcactagctctgtggcaacacggcggcgggagcggcgggtgctggtcatggtg
gtcaccatggtgctctgcttcctcctctgctggctgccctatggcgtggtggccctgatg
gctaccttcgggcctggggagccccccggcccggaggccagtatcatgccgtcgctgctg
gccaagtcctcggcagtcgtcaaccccttcatctacatcttcatgaacaagcagttccac
cgctgtttcagagccttcttcagatgctcggccgtggaaggaggccccactttctccatg
gtgaccaagacgctacgcagcgtccagccggacctgcgcgaccgccacgtgagcaccgcc
gcgccgtcgtctgctcacacctcgccgccatccgtccgccggtcttcagaggcggacgac
cggccgccaagtctctctgaccgtcctcgacccagactcgctctggtggctcattacaga
cagtga
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