Syngnathus scovelli (Gulf pipefish): 125986213
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Entry
125986213 CDS
T08785
Symbol
atp8a2
Name
(RefSeq) phospholipid-transporting ATPase IB isoform X1
KO
K14802
phospholipid-transporting ATPase [EC:
7.6.2.1
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125986213 (atp8a2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sscv03009
]
125986213 (atp8a2)
Enzymes [BR:
sscv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.1 P-type phospholipid transporter
125986213 (atp8a2)
Ribosome biogenesis [BR:
sscv03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
125986213 (atp8a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PhoLip_ATPase_C
PhoLip_ATPase_N
Cation_ATPase
E1-E2_ATPase
Hydrolase
Hydrolase_3
Colicin_im
DUF4260
Motif
Other DBs
NCBI-GeneID:
125986213
NCBI-ProteinID:
XP_049605709
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All DBs
Position
18:complement(11710644..11732536)
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AA seq
1220 aa
AA seq
DB search
MYFNRGAKKIHSEGEQLVLTAIRQTPSEPQDPSRKAGARPPDRFDKTSPLSHQSNGAGPA
CSSAGYHKADDEMSGTTSQAEPVDATARAVLLNRPQTTKFCDNHVSTTKYGVLSFLPRFM
YEQIRRAANAFFLFITLMQQIPDVSPTGRYTTLVPLIFILTVAGIKEIIEDYKRHKADNT
VNKKKTTVLRNGAWQTIIWKQVAVGDIVKVTNGQHLPADMVIVSSSEPQAMCYTETSNLD
GETNLKIRQGLPLTAGFQTLEDLLSLSGVLECEGPNRHLYDFTGTLRLENQKAAPLGPDQ
VLLRGAQIRNTQWVVGIVVYTGHDSKLMQNSTKAPLKRSNVERVTNMQILVLFGILLVMA
LVSSVGAAIWNRQYTEEACWYLSRQGDISTNFAYNLLTFIILYNNLIPISLLVTLEVVKF
TQALFINWDVEMYYAETDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNVMHFKKCTIAG
ITYGHFPDLDCDRSMEDFSNLPSSSNNSTEFDDPALIQNIEKGHPTSPQICEFLTMMAVC
HTVVPERNDNQIIYQASSPDEGALVKGAKGLGFVFTGRTPDSVIIEARGKEMSYQLLNVL
EFSSNRKRMSAVVRTPNGRLRLYCKGADNVIFERLTEDSQYKDLTIAHLEQFATEGLRTL
CFAYVDLREDAYQEWLKKYNDVSTVLKDRAQKLEECYELLEKNLLLLGATAIEDRLQAGV
PETIATLMRADIKIWVLTGDKQETAINIGYSCRLVTHGMSLIIVNEDSLDATRSTLTEHC
SSLGDSLRKENELALIIDGQTLKYALSFELRQAFLDLALSCKAVICCRVSPLQKSEIVDM
VKKHVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNSSDYSIAQFSYLEKLLLVH
GAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFT
LGIFDRPCSQQNMLRFPQLYRITQNAEGFNTKVFWGHCINALIHSIILFWFPLKMLEHDS
PFKTGQGNDYLFVGNMVYTYVVVTVCLKAGMETTAWTRFSHLAVWGSMLLWLVFFGVYSS
IWPTFPMAPDMLGQAGNVMQCWYFWLGLLLVPAVCLLKDFVWAATRRSVRKSLLEEVQEL
EARAVDPGAAVLRDASGRSLNERAHLLTRVFRKTPSSIGRSNSLQQPVTHGYAFSQEEHG
VVSQSQVVRSYDTTRQRPSI
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcaaccggggggccaagaagatccacagcgagggagagcagttagtgttgact
gccattaggcagaccccttctgagccccaggaccccagccggaaggcgggtgcccgcccc
ccagacaggtttgacaaaacctcgcctctgtctcatcaatccaacggcgcaggacccgct
tgctcgtcggccggctaccacaaggcagatgatgagatgtccggcaccacgtcgcaggcg
gagcccgtagacgccacggcgcgcgccgtgctgctcaaccggccccagaccaccaagttc
tgcgacaaccacgtcagtaccaccaagtatggcgtcctctcctttcttccccgcttcatg
tacgagcagatccgcagggccgccaacgccttcttcctcttcatcacactcatgcagcaa
atccccgacgtctccccgaccggccgctacaccacgctggtgccgctcatcttcatcctc
accgtggctggcatcaaggagatcatcgaggactacaaacgacataaagcggacaacacg
gtcaacaagaagaagaccaccgtgttgcgtaacggagcatggcagaccatcatctggaag
caggttgcggtcggagacatcgtgaaggtgaccaacggccagcatcttccggccgacatg
gttattgtgtcatccagtgaacctcaggccatgtgctacacggagacctccaacctggat
ggggaaaccaacctgaagatccgacagggtctcccgctcacagcgggcttccagacactc
gaggacctgttgtcgttatctggcgttttggagtgcgaaggtcccaacagacatttgtac
gacttcaccggaaccctgcggctggaaaatcaaaaagctgctcctctgggcccagaccag
gtcctactacgtggcgcccagatccggaacacccagtgggtggtgggaatcgtcgtctac
accggccacgactccaaactcatgcagaactccaccaaggcgcccctgaagcgctccaac
gtggagcgggtgaccaacatgcagatcctggtgctgtttggcatcctgctggtcatggcc
ttggtcagctcggtgggcgccgccatttggaacaggcagtacaccgaggaagcttgctgg
tatctgtcccggcaaggtgacatctccaccaactttgcgtacaacctgctgaccttcatc
atcctgtacaacaacctgatccccatcagcctgctggtcactctggaggtggtcaagttc
acgcaggccctcttcatcaactgggatgtggagatgtactacgccgagacggacacgcca
gccatggctcgaacgtccaacctgaacgaggagctgggccaggtgaagtatttgttttcg
gacaaaacaggaacgctcacctgcaacgtcatgcactttaaaaagtgcaccatagcggga
atcacttacggccacttccccgatctcgactgcgatcgttccatggaggacttcagcaat
ctgccatccagcagtaacaactccaccgagttcgacgacccggctctcatccagaacata
gagaaaggccacccgacgtcccctcagatctgcgagttcttgaccatgatggccgtgtgc
cacacggtggtgcccgagcgcaacgacaaccagatcatctaccaggcctcctcgccagat
gagggcgctctagtcaagggggccaagggtctgggcttcgtcttcacgggccggacgccc
gattcggtcatcatcgaagccagaggcaaggagatgagctaccagttgctgaacgtgttg
gagttttccagtaaccgcaagcgcatgtcggcggtggtgaggaccccaaacgggcggctg
aggctctattgcaaaggagcggataatgtcatctttgaacgtttgaccgaggactctcag
tacaaagacttgaccatcgctcacttggagcagtttgccacggaaggcctgagaactttg
tgtttcgcctacgtggacctgcgggaggacgcctaccaggagtggctgaaaaaatacaac
gacgtcagcactgtactcaaagaccgggcgcaaaaactggaggagtgctatgaactactg
gaaaagaatctgctgctgctgggcgccaccgccatcgaggaccgcctccaggccggcgtc
cccgaaaccatcgccacgctgatgcgggccgacatcaagatctgggtcctgaccggggac
aagcaggagacggccatcaacatcggctactcgtgccgcctggtgacgcacggcatgtcc
ctcatcatcgtcaatgaggactccctggatgccacccgctccacgctaaccgagcactgc
tcatccctgggcgactccctgcgaaaggagaacgagctagcgctgatcatcgacggccag
accctcaagtacgctttgtccttcgagctgcgccaggccttcctggacctggccctatcg
tgcaaggccgtcatctgctgccgagtgtcgcccctgcaaaagtctgaaatcgtggacatg
gtgaagaagcacgtgaaggccatcacgctggccatcggcgacggcgctaatgacgtgggc
atgatccagacggcgcacgtgggcgtgggcatcagcggcaacgagggcatgcaggccacc
aactcctccgactactccatcgcgcagttctcctacctggagaagctgctgctggtgcac
ggcgcgtggagctacaaccgtgtgaccaagtgcatcctctactgcttttacaagaacgtg
gtgctttacatcatcgagctgtggttcgccttcgtcaacggcttctcgggccagatcctc
ttcgagcgctggtgcatcggcctctacaatgtgatattcacggccctgccgccgttcact
ctgggcatcttcgaccggccgtgcagccagcagaacatgctgcgcttccctcaactctac
cggatcacccagaatgccgagggcttcaacaccaaggtgttctggggtcactgtatcaac
gcactgattcactcgattattctcttttggtttcctctcaagatgctggagcacgactcg
cccttcaaaaccggtcagggcaatgactacctttttgttggcaacatggtctacacgtac
gtcgtggtcacagtgtgtctcaaagccggaatggagaccaccgcttggacccggttctcc
cacctggccgtgtgggggagcatgctcctgtggctggtcttctttggagtctactcgtcc
atctggcccaccttccccatggcccccgacatgcttggccaggctggcaacgtgatgcag
tgctggtacttctggttaggtctgctcctggtgcccgccgtctgtttgctcaaggacttc
gtttgggcggcgacgcgtcggtcggtgaggaagtcgctgctggaggaagtgcaggagctg
gaggctcgcgccgtggacccgggcgccgccgtgctcagggacgccagcggacgcagtcta
aacgaacgtgcccatctgctgacaagagtctttaggaagacgccttccagcatcggacgc
tccaactcgctgcagcagcccgtcacgcatggctacgccttctcccaggaggagcacggc
gtggtgtcccaatcgcaggtggtgcgctcgtacgacaccacccgccaacggcccagcatc
taa
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