Syngnathus scovelli (Gulf pipefish): 125986242
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Entry
125986242 CDS
T08785
Symbol
nsun6
Name
(RefSeq) tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 isoform X1
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sscv03016
]
125986242 (nsun6)
Transfer RNA biogenesis [BR:
sscv03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
125986242 (nsun6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
FtsJ
PUA
PCMT
Methyltransf_25
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
125986242
NCBI-ProteinID:
XP_049605780
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Position
18:complement(5023388..5028951)
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AA seq
458 aa
AA seq
DB search
MSVFPRISLRPEVVHYLKGDFLNKELLASIGHQEAERHFQTLLTCLSHPPSYTCVRASVH
LASLEEIKRKLGEELKKQTCVSEGEELEIDTHPSVPDVLLIPVVGPRCVQQLSSEVVAGV
QCGNAVLRGAHVFAPGILACPKYMKSGDTVSVFSDVEGKCTRGAFGFHGKRTFVGNGVAE
KDRADIFSTGETIRGVGVRMTEPLYWTPSFDGVLPRLAFLQNLPSVVVGHVLGPQPGERV
LDMCAAPGGKTCHIAALMEDRGEVVALDRIRNKIELIRQNAERLQLRSVKAFCFNSTKVV
SDDIIGDREGPPFASECFDRVLLDAPCSGLGQRPNMVSSWSLKEVCSYPPLQRSLFHAAV
HALKRGGVLVYSTCTVTLAENEEQVAWALRTFPRLTLQPQEPRVGGDGMPGAGLTPEQLG
LLQRFRPELSWEAAATMPLAKRADGDTIGFFIAKFQKN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtctttccgagaatttctctgaggccggaggtcgtccattacttgaaaggagat
ttcctaaacaaagagttgttggcgtccatcggccatcaggaagccgagcgccactttcag
acgcttctcacctgcctgtcgcatcctccgtcatacacttgcgtccgggccagtgtccac
ctggcgtccctggaagagattaaacgaaaactgggtgaggagctcaagaagcaaacgtgt
gtatctgagggtgaggagcttgagatcgacactcatcccagcgttccggatgtgcttctg
atccctgtggttggaccgagatgtgtgcagcagctcagctccgaggtggtggcaggtgtt
caatgcggcaacgctgtgctcaggggcgcccacgtctttgcacccggaatacttgcctgt
ccaaaatacatgaagtccggggacaccgtgtcggtgttctctgacgtggagggaaagtgc
acccgaggagcattcggctttcacggcaagagaacatttgtgggcaacggtgtggccgaa
aaggaccgcgccgacattttcagcacgggagaaaccatcaggggcgttggcgtgcgtatg
acggaacccctttactggactccctcctttgatggagtcttacctcgtctggccttctta
cagaaccttccatctgtggtggtgggccacgttttgggtcctcaacccggagagcgcgtc
ctggacatgtgcgccgccccggggggaaagacgtgtcacatcgcagccctcatggaggat
cggggcgaagtggtggccttggacaggatccgaaacaagattgagctgattcgccagaat
gctgaaaggctgcaattgcgtagcgtgaaggcattttgcttcaacagcaccaaagtcgta
agcgatgacatcatcggcgaccgagaagggccaccctttgcttctgagtgcttcgaccgc
gtgctcttggacgcgccctgcagcgggctcggccagaggccaaacatggtgagctcttgg
agtctgaaggaagtttgctcttacccacccctgcaaagaagcctcttccatgctgcggtg
cacgcattgaagcgtggtggcgttctggtgtacagcacgtgcacagtgacactggcagag
aacgaggagcaggtggcctgggcccttcgcaccttccccagactcacgctgcagcctcag
gagcctcgcgtggggggtgatggcatgccgggtgcggggctgaccccggagcagctcggc
ctcctccagaggttccgaccagagttgagctgggaggctgccgccacgatgccccttgcc
aaaagggcggacggggacaccatcggattctttatcgccaaattccagaaaaactga
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