Syngnathus scovelli (Gulf pipefish): 125986256
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Entry
125986256 CDS
T08785
Symbol
klhl40b
Name
(RefSeq) kelch-like protein 40b
KO
K10473
kelch repeat and BTB domain-containing protein 5/10
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125986256 (klhl40b)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
125986256 (klhl40b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_1
BTB
Kelch_KLHDC2_KLHL20_DRC7
BACK
Beta-prop_ATRN-LZTR1
Kelch_6
Kelch_4
Kelch_2
Kelch_3
Kelch_5
NANM
BTB_KLHL33
BTB_BTBDG
DUF6242
Motif
Other DBs
NCBI-GeneID:
125986256
NCBI-ProteinID:
XP_049605817
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Position
18:9446876..9449562
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AA seq
611 aa
AA seq
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MALPVNPMDEPRVYQQTLLQDGLYDLLENDKLVDCILKIKDKEFPCHRLVLCACSSFFRA
LFLSDVDESKKREVVLEDVEPGVMGLILKYLYTSRINVTEQNVQDIFAVANLYQIPSIFT
VCVSFLQKRLSLSNCLAVFRLGLMLDCPRLAVSARNFACERFRLISRDEDFLQLQPGELA
AILANDNLDVDSEEVVFEALMNWVARDLGEREKELPGLLDCVRLRLVGEDYLKDKVEKNK
LILKNPELQKKLQLVRDAQAGKMPEIKSITKKKKEDEAGNEEDEEQEENLLPSILNDNMR
FGMFVRELILMVGDSGSVAYDPMGNDCFMASVSTQVPKNHVSLVTKENQIFVAGGLFIDE
QNKEDPLCSYFLQYDPVNTDWLGMPPLPSPRFLFGFGEAENSIFVMGGKEVKDQERTLDS
VMVYDRQSFKWGESDPIPYAVYGHATVSSNDKVYVIGGKGDDKNCLSKMVVYDAKRFEWK
ELAPMKVARSLFGATVHQNKIYVAAGVTDTGLTDSVEVYDIATNKWSDFEPFPQERSSLN
LVSLGGSLFAVGGFAMVPLEDSEDIIPKEMNDIWRYNETDNKWIGILREIQFATGATILG
VRLNTLRLTKM
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggctctaccggtgaaccctatggacgagccccgggtgtaccagcagacacttcttcag
gatggcctatatgatctactggagaatgacaagctggtggactgcattctgaaaatcaag
gacaaggagttcccatgccaccgcttggtcttgtgcgcttgcagttcgtttttccgtgct
ctctttctgtctgacgtagatgagagcaaaaaacgtgaggtggttctggaggatgttgag
ccgggggtcatggggctgatcctcaagtacttgtacacctccaggatcaatgtgaccgag
cagaatgttcaggacatcttcgccgtggccaacctgtatcagatcccgtcaattttcacg
gtatgcgtttcgttcctccagaaacgtctgagtctcagtaattgcctggcagtcttcaga
ctcggcttgatgctggactgccccaggttggccgtctcggctcggaactttgcctgcgag
cgcttccggctcatctccagagatgaggacttcctccagctgcagcccggtgagctggcc
gccatcttggccaatgacaacctggacgtggactctgaggaagtcgtgtttgaggctttg
atgaactgggtggcccgagacttgggggaacgggagaaggaactgcccgggttgctggac
tgcgttcgcttgcgtctggtaggtgaggattacttgaaggacaaagtggagaagaacaaa
ctcatcttgaaaaatccagagttgcaaaagaagcttcaattagtcagagatgctcaggcg
gggaaaatgcctgaaattaaatccatcaccaagaagaagaaggaagatgaagcaggaaat
gaggaggatgaggaacaagaggagaatcttcttccgagtatcctgaatgacaacatgcgc
ttcgggatgtttgttcgtgaactgatcctgatggtcggcgattctgggtctgtggcctac
gacccgatggggaacgactgcttcatggcgtcagtctccacccaggttcccaagaaccac
gtcagcctggtgaccaaggagaaccagatctttgtggccggtgggttgttcattgacgag
cagaacaaggaggatccgctctgctcttacttcttacagtatgacccggtcaacaccgac
tggttgggcatgccgccgctcccgtccccccgtttcctgtttggattcggggaggccgag
aactccatcttcgtcatgggagggaaggaagtgaaggaccaggagcgcacattggactcg
gttatggtctacgacaggcaatctttcaaatggggcgagtcggacccaattccatatgcg
gtctatggacatgcgactgtttcatccaacgataaggtttacgtgattggaggaaaaggg
gacgacaagaactgcttgagcaagatggtcgtatatgatgccaagaggtttgaatggaag
gagctggctcccatgaaggtggcacgctcgttatttggagcaaccgttcaccagaacaaa
atctacgtagcggccggagtcacagatacgggtctaaccgattctgtggaggtctacgac
atcgccaccaataaatggtccgactttgagccgttcccccaagaacgtagttccctgaat
ttggtttctctgggaggttcactctttgctgtgggaggtttcgcgatggtgccgttggaa
gatagcgaggacatcattcctaaagagatgaacgatatttggaggtataacgagacagac
aacaagtggattgggatcctgagagagattcaattcgccacaggcgccactattttgggg
gtccgactcaacacactgcgactcaccaagatgtaa
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