Syngnathus scovelli (Gulf pipefish): 125986321
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Entry
125986321 CDS
T08785
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125986321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125986321
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125986321
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
HECT type E3
125986321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
DUF3335
Motif
Other DBs
NCBI-GeneID:
125986321
NCBI-ProteinID:
XP_049605933
LinkDB
All DBs
Position
Unknown
AA seq
1077 aa
AA seq
DB search
MFSFEGDFKTRPKVSLGGASKKEAKASLLHRTQEERRKREDDRKRLKNAILIQSYVRGYQ
DLKRQYAIQRAHFDDCANQTQPVLEAPTLSLLSRQLIFFYRQSVDAHRLIWLCQNLVKHN
CQFVKLLVGPHRQTCMFQIKRLLGFCCRLLQNCGDDSLNVAVPMRMLEIFSSERVYLPVL
ADANCVASTVEQILHYMIQKGYYRSLYILVTHRLPPSLEYSDSPSIPLASTLLEHILKPL
HFSYSSCTAGARHFVFAAFTEEFISAPFTEQIFHFFIPALSDPRLAFPFEAFLGSLRNTV
TSSPVAQNRAPWIFYFVLSAGENCLGSLSEEGLLLYLSALRTLLPLLPVTESCNRPEVGS
DSEDDSDADIHPLPVKDDSRISVQLITEECVRKLDTKQQTNTLLNLVWRDSASEEVFTMM
ASICHTLMVQHRLLVPKVRLLYSLAFNARFLRHLWHLITSMTTKMITGSMVPLLQLISRG
SPMSYEDSNRIIPLFYLFSSLFSHSLISVHDSEFFEHEAEGQQTQLSTMPFTLLELVTLS
RCLRDACLGIIKLAYPETKTEHREEYMAAFRSVGVKTNAEVQQRIQAEQKRWVQLFKVIT
NLVKMLKARDIRRPFCPSEHWLSQEVNIRADKVTQLYVPSARHVWRTRRMGRIGPLQSTL
DVGSEPPQLSVSEERHLAILTELPFVVPFEERVKIFQRLIYADKRDVQGDGPFSNGIVVT
IRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKSGFN
PNQGMFKTTNEGLLYPNPAAETLVGESFARHYYFLGRILGKALYENMLVELPFASFFLSK
LLGTSADVDIHHLASLDPEMYRNLLFLKSYEGDVEELGLNFTVVNNDLGEAQVVELKLGG
KDIPVTTANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVNLEWLRMFDQQEIQVLISG
AHVPICLDDLKKFTNYSGGYTATHPVIQIFWEVVEGFTDEEKRKLLKFVTSCSRPPLLGF
KELYPAFCVHNGGTDLDRLPTASTCMNLLKLPEFYSQHQMRNKLLYAIESSSGFELS
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcttcgagggtgatttcaagacgagacctaaggtgtcactcggaggagcaagt
aaaaaggaagcgaaagcatccctgctgcatcgcactcaagaagagagaagaaaaagagag
gatgatagaaaacggctgaagaacgccatcctcattcagtcctatgtacgtggctaccaa
gacttgaagcgacagtacgcgatccagagggcccattttgacgactgcgccaaccagaca
cagcccgttttggaagccccgaccctaagtctgctttcgaggcagctcatctttttctac
cgacagagcgtggatgcgcaccgattgatatggctgtgccagaacctggtgaaacacaac
tgtcagtttgtcaagctgctcgtgggtccacacaggcagacgtgtatgtttcagatcaag
aggctattgggtttttgctgcagactcctgcagaactgcggtgacgacagcttaaatgtg
gccgttcccatgcggatgttggaaatcttctcgtcggagagagtctacttgcccgtcttg
gctgacgccaactgtgtggcgtcaacggtggagcagattttgcactatatgattcagaaa
ggatattacaggtcgctgtacattttggtgactcaccgactccctccgagtctggagtac
agcgactctccttctattcccttggcaagcacactattggagcacatcctcaaacctttg
cactttagctactcctcctgcacagcgggcgccaggcactttgtctttgccgccttcacc
gaggagttcatttcggcgcccttcacggagcagatctttcacttcttcatcccggccctg
tccgacccccggctggccttccccttcgaggccttcctcggctccctccggaacaccgtc
acctcttcccccgtggcccagaatcgcgccccctggatattttactttgtcctctctgca
ggagagaactgcctgggttcgctctcggaggaaggcctgctgctgtatttaagtgctctg
cggacattgctgcccctgttgcccgtgaccgagagctgcaaccggcccgaggtgggcagc
gactccgaggatgactctgacgccgatatccacccgctgcccgtgaaggatgacagtcgc
atctccgtgcagctgatcactgaggaatgcgtgcgcaagctggacaccaaacagcagacc
aacacgctactcaacctggtgtggagggactcggccagtgaggaagtgttcaccatgatg
gcgtccatctgtcacacgctcatggtgcagcatcgcctcctggttcccaaagtcagactt
ctgtacagtttagccttcaacgcacggttcctacggcatctctggcacctgatcacctcc
atgacgaccaaaatgattaccggctccatggttccgctgctgcagctgatctccagaggc
tcgcccatgtcctacgaagactccaaccgcatcattccgctcttctacctcttcagctcc
ctcttcagccactcgctcatctccgtgcacgacagcgagttttttgagcacgaagcggaa
ggtcagcagacccagttgtccaccatgcctttcacacttttggagctggtgactctgtcc
cgctgcctgagggacgcgtgcctcggcatcatcaagctggcctacccggagaccaagacg
gagcaccgcgaggagtacatggcggccttccgcagcgtgggcgtcaagaccaacgccgag
gtgcagcagcgcatccaggccgagcagaaacgctgggtgcagctctttaaggtcatcaca
aacttggtgaaaatgttgaaggctcgcgacatccgccgacccttctgcccatcggaacac
tggctctctcaggaggtcaacattcgagccgataaggtcactcagctctacgtgccgtct
gctcgacacgtgtggagaaccagaaggatgggccgcatcggaccgctccaatcaacactg
gacgtgggctctgagcctccgcagctgtccgtgtcggaggagagacatctggctatcctc
accgagctcccttttgtcgttccgttcgaggagcgagtcaagatcttccagaggttaatc
tatgccgacaagcgggacgtccagggggacgggcccttctccaacggcatcgtcgtcacc
attcgacgtaactacatctacgaagacgcctacgacaaactctcgccagagaacgagcca
gacttgaagaaaagaatccgggtgcacctgctgaacgcccacggcctggacgaggcgggc
atcgacggcgggggcatcttccgcgagttcctcaacgagctcctcaagtcgggcttcaac
cccaaccagggcatgttcaagaccaccaacgaaggcctgctgtaccccaaccccgccgcc
gagacgctggtgggggagtcctttgcgcgacactactactttctgggcaggattctgggc
aaggctctttacgagaacatgctggtggagttgccctttgccagtttcttcctgtccaag
ttgctgggcaccagcgccgacgtggacatccaccatctggcctctctggacccagagatg
taccggaaccttctcttcctcaagagctacgagggcgacgtggaggagctgggtctcaac
ttcacggtggtcaacaacgatctgggagaggctcaggtggtggaactgaagctgggcggg
aaggacattcccgtcaccacggccaaccgcatcgcgtacatccacctggtggccgactac
cggctcaacaagcagatccggccgcactgcctggccttcaggcaggggctggccaacgtg
gtcaacctggagtggctgcgcatgtttgaccagcaggagatccaggtgctgatatccggc
gctcacgtgccaatttgtctcgatgacctgaaaaagtttacaaactactcagggggctac
acggccacgcaccccgtcatccagatcttctgggaggtggtggaaggctttacagacgaa
gagaagcgcaagcttctcaagttcgtcaccagctgctccagacctcctctgctcggcttc
aaggagttgtacccagccttctgcgtccacaacggcggcaccgacctggacaggctgccc
acggccagcacctgcatgaacttgctcaagctgcccgagttctacagccagcatcagatg
aggaacaagctgctctacgccatcgagtcgtcgtccggctttgagctgagctga
DBGET
integrated database retrieval system
