Syngnathus scovelli (Gulf pipefish): 125986325
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Entry
125986325 CDS
T08785
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b
KO
K09299
zinc finger homeobox protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125986325 (zeb1b)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
125986325 (zeb1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-C2H2_15
Homeodomain
zf-met
zf-H2C2_5
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-C2HC_2
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
125986325
NCBI-ProteinID:
XP_049605937
LinkDB
All DBs
Position
18:complement(9078966..9114721)
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AA seq
1060 aa
AA seq
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MADGPRCKRRKQANPRRNNVTNYNNVVEAGTDSDDEDKLHIVEEEGSLADGADCDSTLPD
DEHPREHWDRVKEDCASDGEDDVSTDALVEEMLQQGDTAVIYPEAPEEETQRHGTPDASI
HDENGTPDSFSQLLTCPYCSRGYKRYSSLKEHIKYRHEKTEECFSCPECSYTFAHRAQLE
RHMTAHKPGRDQRHITQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKKR
FSHSGSYSSHISSKKCISLISVNGRQRLGNNKNQTQVQTPILPTSPSVLRTQIREKLEHS
KPLQEQLPLNQIKSEPMDYEYKPTVMTSMAGVNGGVYSGGAAAPLQGTVQAVVLPTVGLV
SPISINIADLQNALKVAVDGNVIRQVLESNAKGQGQASLGLTTGTLHPSQQQLISAISLP
IVGQDGNAKIIINYNLDPNQGQLTAQNLKKEHELFSTAQPSTESFKCQKLPEDLTIRSTR
TTDPKEEDKTTKTCLLCDNCPAGLEGLHALKHCKKESLRLNGESGVAALLSEGGLSNQPK
NLLSLLKAYFALNAEPTKDELAKISDSVSLPLHVVKKWFDKMQEGQISLGAPTPPSEEED
ACDSNNVVSLIQGKASMSPSLTQDSPTEATPAEINGTHSSPASPLPLNLRGDGLLQDRPP
HSTDAPLDLSLPKPDKEETEAVLAKSRNHPSPSSIRTNLDEPLNLTCTKKDASPLSCLGS
SPVTLYASPPSAKPLNIVTTQLPTLVAIADQGRMQCLRALSTNNKQTILIPQLAYTYTTT
ANSPAGTETQETIHLNGIKEEKQDTSSEGMSAMEEHNDSDSGPLRKKMKKTDSGMYACDL
CDKIFQKSSSLLRHKYEHTGKRPHECSICTKAFKHKHHLIEHMRLHSGEKPYQCDKCGKR
FSHSGSYSQHMNHRYSYCKKESQSQGGGGRDSPEEDALSRVRGSHLAPFQMDSDERGSST
REDEESEEFEEEEEEGAVDMDDIQVVQIGDEGGDEDNNEAEEKPAGMEEEADTRQEDEGD
KAVDGEQGVTRERDEEEVVGESGGDVACEEDESQEKGDSD
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggaacaacgtg
accaactacaataatgtggtggaagctggcacagactccgacgatgaggacaagttgcac
atcgtggaggaggaaggcagcctggcggacggggcggactgcgacagcaccctaccagac
gacgagcaccccagggagcattgggatcgagtgaaagaagactgcgcgtcagacggggag
gacgacgtgagcacagacgccttggtggaggagatgcttcaacaaggggatacggccgtc
atttacccagaagccccggaggaggagacgcaacgccacggcacccctgacgccagcatt
cacgatgaaaacggaactcctgattctttctctcagctgctcacctgcccctattgttca
cggggctacaagcgttacagctccctgaaggagcacatcaagtatcggcacgagaagacc
gaggaatgcttcagctgccccgagtgcagctacacttttgcacatcgcgcacaactggag
agacacatgacggcccacaagccaggaagagatcagagacacatcacacagtcgggaggc
aatcgcaaattcaagtgcactgaatgtggcaaagcgtttaagtataagcaccatctcaag
gagcacctacgcattcacagtggcgaaaaaccctacgagtgttccaactgcaagaagcgc
ttctcgcattcgggctcgtacagctcgcacatcagcagcaaaaagtgcatcagcctcatc
tcggtcaacggcagacagcgactgggcaacaataaaaaccagacccaggttcaaactcca
atccttcccacgtcaccctctgtcctccgcacgcaaatacgagaaaagctggagcacagt
aagccactgcaggaacagctgcccctgaaccagatcaaaagcgagcctatggactatgaa
tacaaacccacggtgatgacctctatggctggtgtgaatggcggagtttacagcggaggg
gctgcggctcctctgcagggcacagttcaagctgtcgtcttgcccaccgtgggattggta
tcgcccatcagcatcaacatagccgacttgcagaacgctctgaaagtggccgtggacggg
aacgtcatccgccaagtcctggaaagcaacgccaaaggccagggtcaggccagcttgggg
ttaaccactggaacgctccacccctcccaacagcagctcatctcagccatcagtttgcca
atcgtcggtcaggacggaaatgcaaaaatcattattaactacaatttagacccaaaccag
ggccagctcacggcgcaaaaccttaagaaggagcatgagctcttctcaactgctcagcca
agcacagagtctttcaagtgtcagaaactccccgaagacctgaccatcaggagcacgagg
accactgatccaaaagaagaggataaaaccactaaaacttgtctcctgtgtgataattgt
cccgctggactggaaggtcttcatgccctcaaacactgcaagaaagaaagtctcagactc
aacggagagtccggtgttgccgccttgctttcagaggggggactttccaaccagcccaaa
aacctcttgtccctgctcaaggcctactttgccttaaacgcagagcccaccaaggacgag
ctggccaagatctccgattcagtcagcctaccacttcacgttgtgaaaaagtggtttgac
aaaatgcaggagggtcaaatctccctcggtgccccaacaccaccttcggaggaagaggac
gcctgtgatagcaacaacgtggtctcgctgatccaggggaaggcctccatgagtccttct
ctgacccaggacagtccaacagaagctaccccggcggagatcaacggcacccatagctct
ccagcctctcctttaccactaaacctgaggggggatggtctccttcaagaccggccccct
catagcactgatgcaccactagacctgtccctgccaaagcccgacaaagaggaaactgaa
gctgtgcttgccaaatcccgcaatcacccctcgccttcctccatccgtaccaacctggac
gaacctttgaacttaacttgcacaaagaaagatgcgtcgccactctcatgcctgggctcc
agccctgtcacgctgtacgccagcccgccaagtgccaaacctctcaatatcgtgaccact
caactccccacgctggtggccattgccgaccagggtcgtatgcaatgtctaagggcgctt
agcaccaacaacaagcagactatcctgatccctcagctggcttatacttacaccactacg
gctaacagcccggctggaacggagacccaggaaaccatccacctcaatgggattaaggaa
gaaaagcaggacacgagctcggagggcatgtccgctatggaggaacacaacgactcggac
tcgggccctctgcgtaagaagatgaagaagacggacagcggcatgtacgcctgtgacctg
tgtgacaagatcttccagaaaagcagctcgctgctcagacacaaatatgagcacacaggg
aaacgaccacacgagtgcagcatttgcaccaaggctttcaaacacaaacatcacttaatc
gaacacatgcgcctccactcgggggagaaaccctaccagtgcgacaaatgcggaaaacgt
ttctcccactcgggctcgtactcccagcacatgaaccatcgctactcctactgcaagaag
gagtctcaaagtcaaggcggaggaggcagggacagcccggaggaggacgccctgagccgg
gtgcggggttcgcacctcgctcccttccagatggactcggacgagcgagggagcagcacc
agagaggacgaggaaagcgaagagtttgaggaggaggaggaggaaggcgccgtggacatg
gatgacatccaggtggtgcagataggggacgaaggcggggacgaggacaacaacgaagcg
gaggagaagccggccgggatggaggaggaagccgacacgagacaagaagacgagggagac
aaggccgtggatggagagcaaggtgtgacacgggagcgagatgaagaggaggtcgtggga
gagagcgggggagacgtggcttgtgaagaagatgaaagccaagagaaaggagatagtgac
taa
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integrated database retrieval system
