Syngnathus scovelli (Gulf pipefish): 125986327
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Entry
125986327 CDS
T08785
Symbol
arhgap12b
Name
(RefSeq) rho GTPase-activating protein 12b isoform X1
KO
K20636
Rho GTPase-activating protein 12/27
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125986327 (arhgap12b)
Membrane trafficking [BR:
sscv04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
125986327 (arhgap12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3-WW_linker
RhoGAP
WW
PH
SH3_1
SH3_10
Glyco_hyd_101C
WW_1
SH3_3
PH_9
SH3_9
Motif
Other DBs
NCBI-GeneID:
125986327
NCBI-ProteinID:
XP_049605942
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All DBs
Position
18:9051004..9070169
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AA seq
875 aa
AA seq
DB search
MAERDGLAIAPGQIYVEVEYDYEYKAKDKMVTIRQGERYILVKKTNEDWWQVRKDEGTKA
FYVPAQYVREVRRALMPPQKPPSRAKPTVLDICPPSNENLNRPQPEMSSFGRPSPSSTPS
PSSDRVTTPALPKDTNQNLGSPHNCKVVAELVLLHNNNNNHHLANKLTPPQIGADSPTMK
EEDNQSRSSDSDKISPQCDLPGNELGKLRNDSESGDELSSSSAEHMQATSPTGPGRSDSP
VYTNLQELKISLSSLPPVPSASPLHIHGDWETHKDLSGRHFYYNRATGERTWKPPRTRDT
TSSSSSSFRGESQASAESELLSSEENCLSTHSSVSDNQYGSPPRGWFEELDEHGHTLYVS
EYTQEKWIKHIDEQGRPYYYNADGSRSEWELPKYNMSPQSGEAPKSRSLERKQPDPIIIT
KWRHSTYVLDLNDKECASAPKLSSPDSDSCPSSPKHPSTPSEKCGVLNVTKITENGKKVR
KNWASSWTVLQGSSLLFAKGQGGSTSWSYYRNGSIPELLLTLLSNWKQSVKPRPAVSYKF
GSNQSKPEFSVDLRGGSVEWASKDKSSKKHVIELKTRQGTELLIQSEIDSVINDWYRALT
ETINTHVWESDEAIEDDMPDSPGAEKQDKEKDSKKNRVVMKTSISMDSSDQKKTRVKLKK
FLTRRPTYQAVKDKGYIKDQVFGCSLSNLCQRENTSVPKFVKMCIDHVENTGLSTDGLYR
VSGNLAVIQKLRFAVNHDEKVELDDIKWEDIHVTTGALKMFFRELPEPLFTYGSFNDFLN
AIKCSDYKQRVNSIIDLIKKLPKPNHDTMQVLFKHLRRVIDHGEANRMTTQSVAIVFGPT
LLRPETETGNIAVHMVYQNQIVELILLEYESIFGR
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagagacgggctcgctattgccccgggacaaatctatgtcgaggtggaatat
gattatgagtacaaggccaaagacaagatggtcaccatccgccaaggggagcgctatatc
ctagtgaagaaaaccaatgaggactggtggcaggtacggaaggacgagggcacgaaggct
ttctacgtgcccgcccagtatgtccgagaggtgcggcgggccttgatgcccccccaaaag
ccaccctcgagggccaaacctaccgttttggatatctgtccgccatcaaatgagaacctt
aaccggccgcagccagaaatgtccagctttgggcgtccatcgccttcctccacgccgtca
ccttcctcagaccgggtcacgacgccagctctgcccaaggatactaaccaaaatttgggg
agcccccataattgcaaggtggtggccgaactggtgctccttcacaacaacaacaataat
catcatctggccaataaattgactccgccacagataggagctgactctcctacgatgaaa
gaggaggacaaccagagcagaagttcagacagtgacaagatctccccacaatgtgaccta
ccaggaaatgaactcggcaagctccgcaacgactctgaatcgggcgatgagctcagtagc
agctcagcggagcacatgcaggctacatcgcctacgggtccgggcaggtcagactcgccg
gtctacaccaacctccaggagcttaagatttccctgtccagccttccgcccgtgccctcc
gcctcgcctctccacatccatggcgactgggagacacacaaagacctgagtggcaggcat
ttctactataaccgagccacgggggagcgcacgtggaaaccgccacgcacccgggacacc
accagcagcagcagcagcagcttccggggggaaagccaagcctcggcggagagtgagctg
ctttcctcggaggaaaactgtctcagcacccattccagtgtgtctgacaaccagtacggg
tcgccccctcgaggctggtttgaagagctggatgagcatgggcacaccctttacgtctcc
gaatacacccaagagaagtggataaaacacattgatgagcaaggccgaccttactactac
aatgccgacggatccaggtctgaatgggaactacccaagtacaacatgtcccctcagtcc
ggtgaggcccccaagagtcggagcttggagaggaagcagccggacccaattatcatcacc
aagtggaggcacagcacttacgttcttgatctcaacgacaaggagtgtgcttcggcgccc
aagctgagctctcccgactctgactcgtgcccatcatctcctaagcacccctcgactcca
tcagaaaagtgcggagtcctaaatgtcaccaaaatcacagagaatggaaaaaaagtcagg
aagaactgggcatcctcgtggacggttttacagggttcctccctcctctttgcaaagggt
caaggtggaagtactagctggtcttattaccgcaatggctccatccccgagctgctcctc
actcttcttagcaactggaagcaatcagtcaagcctcgtcctgctgtctcctataagttt
ggcagcaaccagtccaagccggaattttccgtcgatttacgcgggggatccgtggaatgg
gcctccaaggacaagtccagcaagaagcatgtcattgagctgaagacacgtcaggggaca
gaactgctgatccagtccgagattgacagcgtcatcaacgactggtaccgggccctgacc
gagaccattaacacacatgtgtgggagtcggacgaggccatcgaggacgatatgcccgac
tctccaggagctgagaaacaggacaaagagaaagactcaaagaagaacagagttgtgatg
aagacctctatcagtatggactcatccgaccagaaaaaaactcgggtaaagctcaagaag
ttcttgacacgccgacctacctaccaggcggtcaaagacaaaggctacattaaagatcag
gtttttggctgcagtttgagcaacctgtgccagcgggagaacacatccgtgcccaaattt
gtgaaaatgtgcattgaccatgtggagaacacaggtctcagtactgatggcttgtatcga
gtcagcggaaacctggcggtgatacagaagctccgttttgctgtgaaccatgacgagaag
gtggaacttgatgacatcaagtgggaggacatccacgtcacgacaggagcactcaaaatg
ttcttccgggaacttccagaacctctattcacttatggatccttcaatgatttccttaat
gcaattaaatgctctgactacaagcagagagtgaactcaattatagacttgataaagaag
ttgccaaaacctaaccacgacacaatgcaagtccttttcaaacatttgcgcagggtgata
gaccacggcgaagccaaccgcatgaccacccagagcgtggccatcgttttcggacccacg
ctcctccggcccgagacggagacgggcaacatcgccgtccacatggtctaccagaaccag
atagtggagctcatactgctggagtacgaaagtatttttggcaggtag
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