Syngnathus scovelli (Gulf pipefish): 125986331
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Entry
125986331 CDS
T08785
Name
(RefSeq) polyhomeotic-like protein 3 isoform X1
KO
K11458
polyhomeotic-like protein 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125986331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125986331
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
125986331
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
zf-FCS_1
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
125986331
NCBI-ProteinID:
XP_049605949
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All DBs
Position
18:5659987..5665630
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AA seq
946 aa
AA seq
DB search
MDKGAGGASQSDRGPASSSSSDSAAAGTPTPPRLTPNPMLLQDLPAPPQTPVTSSPPPPL
TPAPSLSTPKMAAAARTSSPHVLVPAPPKLTTTASSALRTYARPILPCASKTTAHVSSSS
VGGTTSSSSPSLSTTASSAKTSMVLTNGSARSVPVPTSNTITPFHTPASPPGRQVPQPHP
AGSPGSARHRTSQQALLLGKGLKGSGQEQVLLRTQMVSNAGTPSGAVGRRLTVASSCLVS
VCGAQLQSVTPRPPLPAALAAPPSLRLKPPASAPPPLSRPQTALFPPLRPRPPTAPCRHL
SVPPPTLYSPVRAVPLRPKLQCVRALSPWVSAALQTQPPPAEIGVLPMTVPPLAASSSET
PPSASRRLQIIALSSARPPQSVARPNLSRREALPLSQSVTSPPRRKDSEAPPAGLHDVHV
TEKDQRRKDEDEPVKMEAKKEADLLERQQMEVTEEDHGDREQPMEVQEEGAAAAAEVPSP
VARPQALKETATESNITETDLPEALPVRPPEACVRAIEAPELPADGTGQEEFCERITDDR
SDIINESVSAHSDNHSALSSLSSQSPPSSPWTDPASHAAAQPLNLSRSQPAVENRRASET
ATEAEPPPDPSEDGPEDRATDRPWQTGPWPQGRDVLTHVVEGFVIQEGLQPFPVNRSSLL
LLPQAAPPPPAQEVNGSKTAVTATEEATEHSDHSTDSQDEDGKDTQHGTRASHCERAVLH
CQFCGKRGHAHNFMRSKRFCSTSCARGFNVRLTKRLRALSAGSRGDRPPRPVLNRAQSVP
GKPLLLRLPRDLWSAGRREKDAKEDKKVVVATEEEHCQEDEEEEEDMEAAGEEEEQEDEG
EEEPVAAVSTRMESPASERVRTSPAATPSTPTSTFKPEPSQWTVEDVTAFIHTLPGCGEV
SSAFRLQEIDGQALLLLTEEHLMGSMNIKLGPALKICAHINALKNL
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggacaagggggcgggcggtgcgagccaatcagaccgcggaccggcctcctcttcctcc
tccgattcggccgccgccggcacgccaacgccgccccgcctcacacccaaccccatgctg
ctgcaggacttgccggcgcccccgcagacgcctgtcacgtcctccccgccgccaccgctc
actcccgcgccatccctctccacacccaagatggcggcggcagccaggacttcctcccct
cacgtcctggtccccgccccccctaaactgaccaccacggcgagttccgcccttcgtacg
tacgctcgccccatactgccctgcgcttccaagaccaccgcgcacgtctcgtcttcttct
gtagggggcaccacttcttcttcttcgccatctttgtcaacaaccgcctcttccgccaaa
acatccatggtgctgaccaatgggagcgcaaggagtgttcccgtgccgacctccaacacc
atcacgcccttccacacacctgctagtccacctggaagacaggtgccacagcctcacccg
gcaggctcgcccggctccgccaggcacaggacttcccaacaggccttgctcctgggaaaa
ggtctcaaaggctccgggcaagagcaggtgctgctcagaactcagatggtgagcaacgcg
ggcacgccgagtggcgctgtcggccgccgcttgacagtggcctcttcttgtctcgtgtcc
gtttgtggcgcgcagcttcagagcgtgactccgaggccgcccctgcccgccgccttggct
gcgcccccctccctgcgcctgaagccccccgcctcggccccgcctccgctctcccggccc
cagacggcgctcttccctcctctgaggccacgtccgccaaccgcgccctgccgccacctg
tcggtaccgcctccgacgctctactcgccggtgcgagccgtccctctgcgccccaaactg
cagtgcgtgcgagcgctgtcgccgtgggtttccgccgctctccagacgcagccaccgccg
gctgagatcggcgtcctccccatgaccgtcccgccgctcgccgcttcgtcctcagagacg
ccgccatccgcatccaggcgcctacaaattatcgctctctcttcagcccgcccaccacag
tctgtcgcacggccgaatttgagcagacgggaagcgcttccgctttctcaaagcgtcaca
tcgcctccccgccggaaggacagcgaggctccgccggcgggcctccacgatgttcatgtg
actgaaaaagaccaaagacggaaagatgaggatgaaccagtcaagatggaggcgaagaag
gaagctgaccttctggagagacagcaaatggaggtgacggaagaagaccacggtgaccgg
gaacagcccatggaggtgcaagaggaaggcgccgccgctgccgctgaggtgccatcacct
gtcgctcggccacaagcgctcaaagagacggcgacagaatcaaacatcaccgagactgat
cttccggaagcgcttcctgtccggcctccggaagcttgcgtacgtgccatcgaggcgccg
gaacttcctgcagacgggaccggccaggaggaattctgtgaacgcatcactgacgacaga
agtgacatcatcaacgagagcgtgtcggcgcactccgacaaccactcagcattgtccagc
ctgtcatcacagtccccaccctcgtctccatggacggatcctgcgtctcacgccgctgcc
cagccgctcaacctcagccggtctcaaccggccgtcgagaacagacgtgcgagcgaaacc
gcgacagaagcggagccgcctccagacccatcggaagacgggcccgaggaccgagcaacg
gacaggccatggcagaccgggccgtggcctcaaggcagagacgtcttgacgcacgtggtc
gaaggcttcgtcatacaggaaggactgcaaccctttcctgtgaaccgctcgtcgctgctt
ttgcttcctcaggcggcgccaccgccgccggcgcaggaagtgaacgggagtaagacggcc
gtgacggcgacagaggaggcgacggaacattctgaccattctacagactcgcaagacgag
gacggcaaagacacacaacacgggacacgagcttcccattgcgagcgcgccgtcctgcat
tgccagttctgtggcaagagaggccacgcccacaacttcatgcgctccaaacgcttctgc
tcgacttcctgcgctcgcgggttcaacgtacgcctgaccaagcggctgcgggcgctgagc
gctggtagccgtggtgacaggccgccacggccggttctcaacagggcgcaatccgtgccg
ggcaaaccactcctgctcagactgcctcgtgatctctggagcgctggacgtagagagaag
gacgccaaagaggacaagaaagttgtggtggcgacggaggaggagcattgccaagaagac
gaggaggaagaggaggacatggaggcagcaggcgaggaggaagagcaggaagacgaaggg
gaggaggaaccagtggccgctgtgtcgaccaggatggagagtccggcgtcagagagagtg
aggacgtcgccggcggcgaccccatccacgcccacgagcacctttaagccagaaccctcg
cagtggactgttgaggacgtcacagccttcatacacacgctgccaggctgtggcgaggtt
tcgtcggctttccgccttcaggagatcgacgggcaagcgttgctgctgctgaccgaagaa
catctgatgggcagcatgaacatcaaactgggacccgcgctcaagatctgtgcgcacatc
aacgcgctcaaaaacctgtaa
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