Syngnathus scovelli (Gulf pipefish): 125986584
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Entry
125986584 CDS
T08785
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125986584 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125986584 (clasp2)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
125986584 (clasp2)
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
125986584 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
TOR1L1_N
HEAT_EZ
Cnd1
MOR2-PAG1_C
TAN
IFRD
HEAT_DAAF5
MMS19_C
Motif
Other DBs
NCBI-GeneID:
125986584
NCBI-ProteinID:
XP_049606261
LinkDB
All DBs
Position
19:complement(5952136..5973582)
Genome browser
AA seq
1543 aa
AA seq
DB search
MEDRDNMEYFYQQVLQKDVTRRLQVGQDLIDYLSDPSRSPDVEQDKARLDKTVDELTGWV
NSSNFKVALLGIDICSAFVDRLGERFRGHLGTVLPALVDRLGDSKDQVRENSQALILRCM
EQSASPMYVWERLVPAFKHKNFRSREGLCLCLSATLSSYGAQTLSLSKIVPHLCTLTADQ
NPQVREASITTIVDIYRHVGERVRVDLAKRGLPATRLQTIFARFDEALNSGNMALSPSHD
RSFDDDDSVDGNRSSSSGFKVPKVPKKTAEPAAARRPSATGKLVSKETAGAMDEDNFVKA
FTDVPTVQIYSSRDLEDNLNNIREICSDDKHDWDQRANAMKKIRSLLVAGATSYDCFYQH
LRLLDGAFKLSAKDLRSQVVREACITVAHLSSVLGNKFDHGAEAIVPVLFNLIPNCAKVM
ATSGVSAIRIIIKHTHVPRLIPLITSNCTSKSVAVRRRCYDFLDLLLQEWQTHSLERHTA
VLVESIKKGIRDADSEARVEARKAYWGLRNHFPGEADALYNSLESSYQRTLQSCLKSSGS
VASLPQSDRSSSSSQESLNRPLSSKWSAAPGRVCAGSKGSGSLSAASLQRSRSDVDVNAA
AVAKQRHAAPTPKGPSRLPPGSYASLDDASDKTDGRVRTKQPLTAASSVSAQVDSRGRSR
TKMVSQSQRSDESDCTPGSQSATPAGAGSRSGSPGRVLTTTALSTMSSSAHRVLPGTAGD
GRRRSRIPRSQGCSRDSSPTRLSVAPSSLSSVYNGASRGARGSRIPRPSMSQGCSREASR
ESSRDTSPVRSFTPLATRSYSRSTGALHTPDAFGAAGSSFGMGQSSRLSSSVSGMRVLNT
GSDVEEALADALLLGDIRSKKKPARRRYENYSMYSDDDANSDASSACSERSYSSRNGGAI
PTYMRQTEDVAEVLNRCASANWSERKEGLLGLQALLKNQRTLSRVELKRLCEIFTRMFAD
PHSKRDSGRVYGTAESGISSASFKRVFSMFLETLVDFILVHKDDLQDWLFVLLTQLLKKM
GADLLGSVQAKVQRALDVTRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILRYIETLTL
QMEAPDFVNSSETRLAVSRIITWTTDPKSSDVRKAAQAVLIALFQLNTPEFTMLLAALPK
TFQDGATKLLQNHLKNTGNVAQATIGSPLARHTPRSPASWSSPVTSPTNTSQNTPSPSAF
DYDTENMNSEDIYSSLKGVTEAIQNFSVRSQEDMNDQLQEGGSAGVDGPVDGGRTALDNK
TSLLNTPLLSSSPRGARKLLSDSPYKPSRKDGSMDDMERLTDEGGMDQSELMGDLLKELS
NHNERVEERKAALSELFKLIHDNTLQVWDEHFKTILLLLLETMSDREPVIRTLALRVLRE
ILNKQPWRFKNYAELTIMKALEAHKDPHKEVARAAEETAAMLALSISPEQCIKVLCPIIQ
SADYPINLAAIKMQTKVVERIPRDGLGGLLPEIVPGLIQGYDNSESSVRKACVFCLVAIY
AVIGEDLKPHLSQLSSSKLKLLNLYIKRAQSGSSGSEPPSDGL
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccgcgacaatatggagtacttctaccagcaggtgctgcagaaggatgtcacc
cgccggttgcaggtcggccaggacctcatcgactacctgagcgacccttctcgctcgcct
gatgtggagcaggacaaagcccggctcgacaagaccgtcgacgagctcaccggttgggtc
aactccagcaatttcaaggtggcgctgttgggcatcgacatctgctctgctttcgtggac
cgccttggcgagcgctttcggggtcacctgggcacagtcctgccagccctggtggaccgg
ctgggggacagcaaggaccaggtccgggagaacagccaagcgctcatccttcgctgcatg
gagcagtcggcctcgcccatgtacgtttgggaaagactggtgcccgccttcaaacacaag
aacttccgcagccgagaaggactctgcctttgcctcagtgccacgctcagctcgtatggc
gcccagacgttgagcctgagcaagattgttcctcatctgtgcactctgacggcggaccag
aaccctcaggtacgagaggcctccatcacaaccatagtggatatttaccgtcacgtcggc
gagagggtacgagtcgacttggcgaagagaggactgcctgccacgcggttgcagaccatc
ttcgctcgctttgatgaagctctgaattcgggcaacatggctctcagccccagtcacgat
cgaagtttcgacgatgacgacagtgtggatgggaaccgctcgtcatcctcggggttcaaa
gtccccaaagtcccgaagaagactgccgagccggcggcggcccgacggcccagtgctacc
ggaaagctagtgtccaaagaaaccgccggggctatggacgaagacaactttgtcaaagcc
ttcacagatgtcccaactgtccagatctactccagcagagatctggaggacaacctcaac
aatatccgggagatctgctccgatgacaagcatgactgggaccagcgggccaacgccatg
aagaagatccgctccctgctggtggccggcgccacctcctacgactgcttctatcagcac
ctccgcctcttggacggcgccttcaagctctcggcgaaggatctccgatcccaagtggtc
cgggaggcctgcatcaccgtggcacatctctcctccgtgctgggcaacaaatttgaccac
ggcgccgaggccatcgtccccgtcctcttcaacctcatccccaactgtgccaaagtcatg
gccacctctggcgtgtcagccattcgaatcattataaagcacactcacgtcccgcgactg
atccccttgatcaccagtaactgcacgtctaagtcggtggccgttcggaggcgctgttat
gacttcctggaccttctgcttcaagagtggcagacacattcgctagagaggcacacggct
gttttagtggaaagcatcaagaagggaattcgagacgccgactcagaggcgcgcgtcgaa
gcccgcaaggcgtactggggtctgaggaaccacttcccgggcgaggcggacgcgctttac
aactctctggagtcgtcgtaccagcgcaccctgcagtcgtgcctgaaaagttcgggcagc
gtggcctcgctgcctcagagcgaccgctcgtcgtcgtcgtcgcaggagagcctcaatcgg
ccgctgtcttcgaaatggtcggcagctccgggccgagtctgtgcgggttcaaaaggcagc
gggtcgttgtcggcggcctccctgcagcgctcccgcagcgacgtggacgtgaacgccgcc
gccgtggccaagcagcggcacgcggcgccgacgccaaaggggcccagccgcctgcccccc
ggctcctacgcctcactggatgatgcctctgataaaacggatggtcgcgtgcggaccaag
cagcccttgacggccgccagcagcgtctccgcccaggtggactcgaggggacgcagccgc
accaaaatggtctcccagtcgcaacgttccgacgaatccgattgcacaccaggatctcag
tctgctacccccgctggtgcgggaagccgcagcggctcgcccggccgcgtgctgaccacc
actgcgctcagcaccatgagctcgtcggcccaccgagtgctaccagggaccgccggggac
gggcgcaggaggagccgcatccctcgaagccagggctgttccagagattcttctcccacc
cgcttgtcagtcgctccctccagcttgagttccgtctacaacggcgccagcagaggagcc
cggggcagccgcatcccccggcccagtatgagtcagggctgcagccgagaggccagcagg
gaaagcagccgggacaccagccccgtacgctccttcacgcccctcgccacgcggagctac
tctcgctccacgggagctctccacacacccgacgctttcggggccgcaggctccagcttc
ggcatgggtcaatccagccgcctgtcgtcctcggtcagcggcatgagggtcctcaacacc
ggctcagacgtggaagaggcgctggcggacgccctgctgttgggagacatacgatctaag
aagaagccggcgcggcggcgctacgagaactacagcatgtattcggacgacgatgccaac
agcgacgcgtccagcgcctgctcggagcgatcctacagctccaggaacggcggcgccatc
cctacctacatgaggcagacggaagacgtggccgaggtgctgaaccgctgcgccagtgcc
aactggtccgaaaggaaggaaggtctactgggcctccaggccctcctgaagaatcagcgc
actctcagccgcgtggagctgaagaggctgtgtgagatcttcactcgcatgtttgccgac
ccgcacagcaagcgagactccggcagggtgtacggcacggcagaatccggtataagctca
gcttccttcaagagagttttcagcatgttcctggagaccttggtggacttcatcctggtc
cacaaggacgaccttcaggactggttgttcgtgttgctcacccagctgctgaagaagatg
ggcgccgacctgctgggctcggtgcaagccaaggtccagagggcgctggacgtgacgcga
gagtccttccccaacgacctccagttcaccatcctcatgaggttcaccgtggaccaaacg
cagacccccaacctcaaggtgaaggtggccattctgcggtacatcgagaccctgacgctg
cagatggaggctcctgactttgtcaactccagcgagactcggctggccgtctcgcgcatt
atcacttggaccaccgaccccaagagctcggatgtcagaaaggcggcccaggcggtgctg
atcgccctcttccagctcaacacgcccgagttcaccatgctgctggcagcgctgcccaag
accttccaggacggagccaccaagctgctccagaaccacctgaagaacacgggcaacgtg
gcccaggccacgataggcagtccgctggcccgacacacccctcgctctccagccagttgg
tccagcccggtgacgtcccccaccaacacatcgcagaacaccccgtcaccaagtgcattc
gactacgacacggagaacatgaactcggaggacatctacagctctttgaagggcgtcacc
gaagccatccagaacttcagcgtgcgcagccaagaagacatgaacgaccagctccaggag
ggcggcagcgccggggtggacggccccgtcgacggcggacgcacagctctggacaacaaa
acttctcttctcaacacgcccctgctctcctccagcccccggggtgcccgcaagctcctc
tcagactctccgtacaaacccagccgcaaagacggcagcatggatgacatggagcggctc
acggatgaaggcggcatggaccagtcggagctgatgggcgacttgctgaaggagctgtct
aatcacaatgagcgtgtggaggagcgcaaggcggcactcagtgagctgttcaagctcatc
catgacaacacgctgcaagtgtgggatgagcatttcaagaccatcttgctgctgctgctg
gagaccatgagcgacagagagcctgtgatccgcacgttggctctacgggtcctgcgggag
attctcaacaagcagccgtggaggttcaagaactacgctgagctcaccatcatgaaggct
ctggaggcgcacaaagatccccacaaggaggtggcacgggcggccgaggagacagcggcc
atgctggcgctgtccatcagccccgagcagtgcatcaaggtcctgtgccccatcatccag
tcggccgactaccccatcaacctggccgctattaagatgcagaccaaagtggtggaaagg
atcccccgcgacggcctcggaggactgctgcccgagatcgtgccgggactcatacagggt
tatgacaactcggagagcagcgtgaggaaggcctgcgtcttctgtttggtggccatctac
gccgtcatcggcgaggacctcaagccgcacctcagccagctctccagcagcaagttgaag
ctgctgaacttgtacatcaagcgcgcccaatcgggctccagcggcagcgaaccgccatca
gatggcctatag
DBGET
integrated database retrieval system
