Syngnathus scovelli (Gulf pipefish): 125986618
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Entry
125986618 CDS
T08785
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125986618 (irx1b)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125986618 (irx1b)
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
125986618
NCBI-ProteinID:
XP_049606315
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All DBs
Position
19:4164457..4167661
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AA seq
440 aa
AA seq
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MAFPQLGYPQFLNAAHEVYAGERPASSREGSSDSGVSSSATAATVGSMLGMYGSPWAAPN
YSAFLPYSGAPDLALISQMGSQYELKDSPGSHPSSLPVHAAQGFYPYGQYPYGDPSRAKT
ATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVTW
GRSAEDRDGRIFSSDNEDEQGKNGSDDDEDEEIDLETVDIERPEEPRAAAEQGCRKGEKE
ADVAGREAATEPRNSESNRTLSVDAAVVKLVDHSPSRQECHRPPQSKPKIWSLAETATAP
DNSHKASHAHHPALAHAGHPALLPGHGIYTCQIGKLHNWANAAFINANSLLNMRSLLGGA
QAGQLPLRGPALPARHDARPGHGTSGTEDDSDGDSSGSFSPKRDDDDSDHRSDSLKSPFQ
LITDRPHHGRGAQRALTSTL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggctttccctcaactggggtacccccagttcctcaacgccgcccatgaagtgtacgcg
ggtgaacgaccggcttctagtcgggaaggaagcagcgatagcggcgtgagctcatctgca
acagccgctactgtcggctccatgctggggatgtacgggagtccatgggcggcccccaac
tacagtgcctttctgccatatagcggagcaccagacctcgccctcatctctcaaatgggc
tcccagtacgagttaaaggacagccctggttcccatccaagctctctacctgtgcacgcc
gctcaaggtttctacccgtatggacagtatccttacggagacccgtcgagggccaagacc
gccacacgagagaccaccagcaccttgaaggcctggctgcaggagcaccagaaaaaccct
taccccaccaaaggggagaagatcatgcttgccatcattacgaggatgacgctcacacag
gtgtccacgtggtttgcaaacgcacgcaggcgtctaaaaaaggagaacaaggtgacgtgg
ggccgcagcgccgaagaccgtgacggacgcatcttcagcagcgacaacgaggacgagcaa
ggcaagaacggcagcgacgacgacgaagacgaggagatcgatttggaaacggtcgacatt
gaaagaccggaggagccgcgcgccgcagcggagcagggctgcaggaagggggagaaagag
gcggatgtggctggcagagaggccgcaacggagccacggaactcggagagcaacaggacg
ctttccgtggacgcggctgtggtcaaactggtggatcactcccccagcagacaggagtgc
cacagaccaccgcagagcaaacccaaaatctggtccttggctgagaccgccacagcaccg
gacaactcgcacaaagcctcccacgcgcaccacccggctttagcgcatgccggacacccg
gcgcttctcccgggccatgggatatacacatgccaaatcggcaaactccacaactgggcc
aacgcggcttttatcaacgccaactcgctattaaacatgaggtcgctgctcggaggagcg
caggccggacaactgcctctgcgcggccctgcgctccccgcgcgtcatgacgcacgaccc
ggacacggaacttcggggacagaagacgacagtgacggagactcgtctggaagctttagt
ccaaaaagagatgatgatgacagcgaccacagatcggattcccttaagtctccattccag
ctcatcactgacagacctcaccatggcagaggagcacagcgagctttaacatcaacatta
tga
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