Syngnathus scovelli (Gulf pipefish): 125986619
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Entry
125986619 CDS
T08785
Symbol
irx4b
Name
(RefSeq) iroquois-class homeodomain protein IRX-4b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125986619 (irx4b)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125986619 (irx4b)
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
RCDG1
Motif
Other DBs
NCBI-GeneID:
125986619
NCBI-ProteinID:
XP_049606316
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All DBs
Position
19:4174852..4178027
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AA seq
396 aa
AA seq
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MAYSQLGYSYSTPSQFLMTTSPLAGCLEPGSPPSHPALRSPVHHLTSGGSIGVCSPYPKC
QAYYNTCSGDPTPLYSRGPLQPKGMPASVHMGTSQTACYPYDYTFGHYSYDRYGYSSTEG
ASRRKNATRETTGTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKK
ENKVTWSPRACKSSEDRGRDEDSDEAEKSLKGDKDHPDQTSADLQSDLEDFDLLESDASD
CEPKPQFIPEDNEADSNLPHAHLAYNPEPDRSSPDFPKDQNAFFPMPDVHGTDNKPKIWS
IAHTAVSLDPGLEPEYPPCMLSSSSSSPGFPSNMALPKADRTQESPVDTLREWVDGVFHG
APFHQSKASTAWKGFNDTTVSDRTQGQTFELIRSSL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcttactctcagctgggatactcctactctactccatcacagtttcttatgactaca
agccccttggctggctgtctggagccgggatcccctccatcccaccccgcgttgcgctcc
ccggttcaccatctcacctctggcggcagcatcggcgtttgcagcccttatccaaagtgc
caagcttactataacacatgctctggtgaccccacacctctctattccaggggaccattg
cagcctaaaggtatgcctgcatctgtgcacatggggacctctcagacagcctgctatccg
tatgattacacattcggccattattcttacgacagatatggttactcgtccacagaagga
gcttcaaggcgtaaaaacgcgacccgagaaacaaccggaaccctgaaggcctggctgcag
gagcatcagaagaacccttatccaaccaaaggagagaagatcatgctggctattatcacc
aggatgaccctcacacaagtgtcgacatggtttgccaatgcccgcaggaggctgaagaag
gagaacaaagtgacgtggtcgccgcgagcttgtaaaagctcagaggacagaggtcgtgat
gaagacagtgacgaagccgagaagtcgcttaaaggagataaagatcatccagatcagacg
tctgccgacttacagagcgatctggaagactttgacctcctggagtccgacgcgtccgac
tgtgaaccaaagccgcagttcatacccgaggacaatgaagccgattctaacctaccacac
gctcacctcgcgtacaacccagagccagacagatcatccccagacttcccgaaagaccag
aacgctttctttccgatgccagatgtgcacggaacagacaacaaacccaaaatctggtcc
atcgctcacaccgccgtgtctctggatcccggtttggaacccgaatatccgccctgtatg
ctgtcgagcagctcatcatctcccggcttcccgtcaaacatggcgctacccaaagcggac
aggacgcaagaatcgccagtggacacactcagggagtgggtggatggcgttttccacggc
gcgccgttccatcagtcgaaagcatccacggcgtggaaaggtttcaacgacacaaccgtg
agcgacagaacacaaggacaaaccttcgaactcattagatcgtctttgtag
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