Syngnathus scovelli (Gulf pipefish): 125986651
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Entry
125986651 CDS
T08785
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X5
KO
K08362
thyroid hormone receptor beta
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125986651 (thrb)
04081 Hormone signaling
125986651 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125986651 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sscv03310
]
125986651 (thrb)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125986651 (thrb)
Nuclear receptors [BR:
sscv03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
125986651 (thrb)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125986651
NCBI-ProteinID:
XP_049606389
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Position
19:complement(36477..45093)
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AA seq
582 aa
AA seq
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MIIFSFSNNVQLDRDSPHRRRNNHLGSQSAGVHFDQVGVKAVWWWRQWQAYEQLLAVACD
VAERLRIQTFTPLLWMNHCIAEISEMYHSMVGDYTIQGGGEHCVYAGDGPGYGHCEAQPL
HHHPPCLEHVWPSSQRDHYLHACVPSALKSDFCSTEIPLNHFYHHPEHSSEMKSDLSHVQ
WMQGSPIKKGYIPSYLDHDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKDLKQSYTC
KYQEKCAIDKVTRNQCQECRFNKCIAVGMATDLVLDESKRLAKRKLIEMNRERRRKEELQ
KTLLDQREPTQKEWDLIRMITEAHMATNAQGNYWKQKRKLLVEESMLLNEITRNLFDTSD
QNALATKETKPTNIGHSSSVNSPAVDLEAFRQLTKIISPAITRVVDFAKKLPMFGELPCE
DQIILLKGCCMEVMSLRAAVRYDPESETLTINGEMAVTRGQLKNGGLGVVSDAIFDLGVS
LSSFNLDDSEVALLQAVILLSSDRPGLRSVKRIERCQEEFLLALEHYINYRKHKVAHLWP
KLLMKVTDLRTIGACHASRFLLMKVECPTELFPPLFLEVFED
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcttcagcttttctaacaacgttcaattagatagagattcaccccacagaagg
cgtaacaatcacctggggtcacagagtgccggagtgcatttcgaccaagttggggtgaaa
gccgtgtggtggtggcggcagtggcaagcgtatgagcagttacttgctgtggcctgtgac
gttgctgaacgtctgaggatacaaaccttcacacctttgctctggatgaaccactgcatc
gcagaaatttccgagatgtatcactctatggttggcgactacacaattcagggcggcgga
gaacactgcgtgtacgccggcgacggtccgggctacggacactgcgaagcccaacctctt
caccatcatccgccgtgcctggagcacgtttggccgtcgagccagcgcgatcattatttg
cacgcttgtgtcccgtccgctttgaagagtgacttttgcagcacggagatcccgctcaat
catttttatcatcaccccgagcattcttccgagatgaaatcggacctctcgcatgtgcaa
tggatgcaaggctcccccatcaagaaagggtacatcccaagttacttggaccacgacgag
ctatgcgtcgtgtgcggggacaaagccacgggctaccattatcgctgcattacctgtgaa
ggctgtaagggctttttcaggcggacaattcagaaagacctgaagcaaagctatacttgc
aagtaccaggaaaaatgtgccatagacaaggtgaccaggaaccagtgccaggagtgtcgc
ttcaacaaatgcattgccgtaggaatggcgactgacctggtgttggatgagagcaagcgg
ctggccaagcgcaagttgatcgagatgaaccgggagcgtcgccgcaaggaggaactccaa
aaaaccctgttggatcaacgtgagcccacgcagaaggagtgggacctcattcgcatgatt
actgaggcccatatggccacaaatgcacaaggaaattactggaagcagaagcgcaaactc
ttggtggaggaaagcatgcttcttaatgaaatcacacgcaatttattcgatacctctgac
cagaatgcgttggcgaccaaggaaaccaagcctacaaacattggtcattcatccagcgta
aatagccctgcagtggatttagaggcattcaggcaattgacaaaaattatcagccctgcc
ataacacgagtggtggactttgccaaaaagctccctatgtttggtgagctgccgtgtgaa
gatcagatcatcctgctgaaaggctgctgtatggaagtcatgtcgttgcgcgccgccgtt
cgctacgatccagagagcgagacgctgacaattaacggagagatggcagtcacacgagga
caacttaagaacggaggcttgggtgtggtgtcggatgccattttcgaccttggtgtctcg
ctgtcctcctttaacttggatgactccgaggtggctcttttacaagcggttatcctgctt
tcatctgatcgtccaggcttgaggagcgtgaagcggattgaacgctgccaagaggaattc
ctgctggctttggaacattacatcaactatcgcaaacataaagtcgctcatttgtggcca
aagctgctgatgaaggtgacagacctgcgaacgattggcgcctgccacgccagccgattc
cttctcatgaaggtggagtgtcccactgagttattccctcctctgttcctggaggtattt
gaggactga
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