Syngnathus scovelli (Gulf pipefish): 125986655
Help
Entry
125986655 CDS
T08785
Symbol
c1galt1a
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X1
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00512
Mucin type O-glycan biosynthesis
sscv00514
Other types of O-glycan biosynthesis
sscv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
125986655 (c1galt1a)
00514 Other types of O-glycan biosynthesis
125986655 (c1galt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sscv01003
]
125986655 (c1galt1a)
Enzymes [BR:
sscv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
125986655 (c1galt1a)
Glycosyltransferases [BR:
sscv01003
]
Glycan extension
Type 3 chain
125986655 (c1galt1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
125986655
NCBI-ProteinID:
XP_049606399
LinkDB
All DBs
Position
19:complement(79751..82125)
Genome browser
AA seq
318 aa
AA seq
DB search
MKFRSRSIFFTGLMIGFTSLRYFSHSNWPPKSHTQDAWQGDQQGVNLSRTRNSGQTSRIL
CWIMTGPKTMESRTKHVKETWAKRCHVVLYMSSVQSDFPTVKLNVSEGRENLYRKTVGAF
EYIYGRHLDNAEWFLKADDDTYVIVENLLYMLSALDPEKPFYLGRRFKPFLRQGYMSGGA
GYVLSKEALRRYIRGFRTGACGHFSSTEDVALGKCMETMKVAPLDTRDVKARQTFHPFPP
ELHLVRQFQKTPWYLAYEHYPPVQGPGCCSDFAVSFHYIYAVRLYALEYLAYHLRPYGYK
YRFIAREHKYWNQSTSQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaggtcccgttcaatcttcttcaccggactgatgattggatttacgtccctg
cgctatttctcccactcaaattggcctcccaagagccatacacaagatgcttggcaagga
gatcaacaaggcgtcaacctgagtcggacaagaaattctgggcaaaccagccgtatcttg
tgttggatcatgaccgggcccaagaccatggagtcccggaccaagcacgttaaggaaacg
tgggcaaagcgctgccacgtggtcttgtacatgagctctgtccagagcgacttccccacc
gtgaaactcaacgtcagcgagggacgagaaaacctgtaccggaagaccgtcggcgccttt
gagtacatctacgggcggcacctggacaacgccgaatggttcttgaaagccgacgacgac
acctacgtgattgtggagaatctcctctacatgttgtccgctctggatcccgagaagcct
ttctacctgggaagaaggtttaaaccttttctccgccaaggctatatgagcggcggcgcc
ggctacgtcctcagcaaggaagccctgagaagatatatccgaggtttcaggacaggggcg
tgcggccacttctcttccaccgaggacgtggctctgggcaagtgtatggagaccatgaag
gtggcgccgctggataccagagacgtgaaagcccggcaaaccttccatcctttccctcca
gagcttcacttggtcagacagttccaaaagaccccttggtacctggcttatgagcactac
cctcccgttcaaggtccaggctgctgttccgatttcgccgtgtcctttcactacatttac
gctgttcgactctatgctctggagtacctggcgtaccatctacggccgtacggatacaaa
tacagatttattgccagggagcataaatattggaaccaaagcacaagccaattgtga
DBGET
integrated database retrieval system
