Syngnathus scovelli (Gulf pipefish): 125986675
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Entry
125986675 CDS
T08785
Symbol
gabbr1b
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid type B receptor subunit 1
KO
K04615
gamma-aminobutyric acid type B receptor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125986675 (gabbr1b)
04082 Neuroactive ligand signaling
125986675 (gabbr1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sscv04030
]
125986675 (gabbr1b)
G protein-coupled receptors [BR:
sscv04030
]
Metabotropic glutamate receptor family
GABA
125986675 (gabbr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
7tm_3
Peripla_BP_6
Sushi
DUF6377
UPF0242
TMF_TATA_bd
DUF4407
Orthopox_A5L
Motif
Other DBs
NCBI-GeneID:
125986675
NCBI-ProteinID:
XP_049606435
LinkDB
All DBs
Position
19:complement(240337..274166)
Genome browser
AA seq
1032 aa
AA seq
DB search
MQPRSLHSIDVSLLIQPPDASCGKMVPLFLLFFFAAWPLLSASAHNTSAGCAIIRPPRDG
GIRYRGLTQEQIRSVQVVPVDYEIEYICRGNRVIVGPKVRKCLPTGTWTDLNQQSRCLLL
CPRVWTSLENGRVSSWPPGLPVEGTVLRYSCLPGFILMGPNSTQCNKLAKWDTPKPVCHY
DRHFKAPGKKKLYIGALFPMSGGWPGGQACLPAAKMALALVNQRADILPDYELELIHYDS
MCDPGEATKLLYDLLYTEPIKIVLMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQ
RFPTFFRTHPSATLHNPTRVQLFQKWKWTKIATIQQTTEVFTSTLDDLEERVKEAAIEIS
VRQSFLTDPAVAVKNLKRQDARIIVGLFYETEARKVFCEVYKEKLYGKKYVWFLIGWYSD
NWFKINDPSVNCTVEQMTEAVEGHVTTEIVMLNPETVRGASNLTSQEFLEQLMSKLGGKN
SEETGGFQEAPLAYDAVWALALALNKTVGPLKAKGRRLEDFNYNNRDVTAEIYRALNTSS
FEGVSGHVVFDAQGSRMAWTLIEQLQGGSYKKIGYYDSTKGNLSWYGNDKWIGSGPPADQ
TMVIEEFRYLSQKLFVSMSVFSSVGILLGIICLTFNIYNSSVRYIQNSQPYLNNMTAVGC
MMALAAIFPLGIDGLHVRRKHFPVVCQFRLWLLGLGFSLAYGSMFTKIWWVHTVFTKKDE
KKEKKKHLEPWKLYATVGVLLAVDFFSLVIWQIVDPLHITVEKFTREAPKGDLDVLIQPL
LEHCSSEKMNTWLGVVYAYKGLLLLLGIFLAYETKSVSTEKINDHRAVGMAIYNVAVLCL
ITAPVTMILSSQQDASFAFASLAIVFSVYITLVVLFVPKMRRLITRGEWQSDAQETMKTG
SSMNNNDEEKSRQLERENKELQKIIQEKEERVSELRNQLSERQALRSRRRHPPSPIKTTA
QLPKWACPPPTPDPWPRRRATLRPFLICTPSRRPSAIPPASTGPTAKRAAITVTPAGCRC
STNELNGSHRFS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgcagccacggagccttcactcaatcgatgtcagcctgctcatccagccgcccgatgct
tcttgtggaaagatggtgccgttgtttcttcttttcttctttgctgcgtggcccttactc
agcgcatctgcacacaatacatctgctggttgcgctatcatccgtccccccagagatggt
ggtataagatacagaggccttacacaggagcagattcgaagtgtgcaggttgtccccgtt
gactatgagatcgagtacatctgcaggggaaaccgtgtgattgtgggacccaaggtcagg
aaatgtctgcccactggcacctggacggacctcaaccagcagagccgatgtttgttgtta
tgccctcgggtgtggacgtctttggaaaacggtcgagtgtcttcgtggccgccggggctc
ccggtggagggaactgtgctgcgctatagctgcctccccggattcatcttgatgggccca
aactccacgcagtgcaacaagttggccaagtgggacacgcccaaacccgtgtgtcactat
gacagacatttcaaagctccgggcaagaagaagctatacatcggcgcgctcttcccaatg
agcggaggctggcccggagggcaagcctgcctccccgccgcgaagatggccttggctctg
gtcaaccagagggccgatattcttcccgactacgagctggagttgattcattacgacagc
atgtgcgatcccggagaagccaccaagctcctttatgaccttctgtacacagaacccatc
aagatcgtactgatgcccggctgcagctcagtgtccacgctggtggctgaggccgctcgc
atgtggaaccttatcgtgctatcgtacgggtccagttctccagctctgtccaaccgccag
cgctttcctactttctttcgcactcatccgtcggccaccttgcacaaccccactcgagtg
cagctcttccagaagtggaagtggaccaagattgccaccattcagcagaccacagaagtt
tttacctcgaccctggacgatctggaagagagggtgaaggaggctgccattgaaatcagc
gttcggcagagtttcctcactgaccccgccgtggccgtcaaaaacctgaagcgtcaggat
gcccgaatcattgttggcctcttctatgaaaccgaagccaggaaggtcttttgcgaggtt
tacaaggagaagctgtacgggaagaaatacgtgtggttcctcatcggctggtactccgac
aactggtttaaaatcaacgatccgtccgtcaactgcacggtggagcaaatgacggaagcc
gtggaaggtcacgtgaccactgagattgtcatgctcaacccggagaccgtacgaggagct
tccaacctgacctcccaggaatttctcgagcagctgatgtcaaagctggggggcaaaaac
tcagaggagacgggcggctttcaagaagctcccctggcctacgacgccgtgtgggctctg
gctctggcgctcaacaagacggtgggacctctgaaggccaaaggtcggcggctggaagat
ttcaattacaacaaccgagacgtaacggccgaaatctaccgcgccctcaacaccagctct
ttcgagggcgtttcgggtcacgtcgtatttgacgcccaaggttctcggatggcctggact
ctaattgaacagctccaaggaggaagctataagaagatcggctactacgacagcaccaaa
ggcaatctgtcctggtatgggaatgacaaatggattggctctggcccccccgcagaccag
accatggtcattgaggagtttcgctacctctcccagaagctatttgtgtccatgtctgtg
ttttcgagtgtgggaatcctgctgggcatcatctgcctcactttcaatatctacaacagc
agtgtcaggtatattcaaaattcccaaccctaccttaacaacatgacagcagtgggctgc
atgatggcgctggctgccatcttccctctgggcattgatggccttcatgtccgcaggaag
catttccctgtcgtctgccagttccgtctttggctgctgggtctgggcttcagcctggcg
tatggaagcatgttcaccaagatctggtgggtccacacggtcttcaccaagaaggatgag
aagaaggagaagaaaaagcacctggagccatggaagctctacgcaaccgtcggcgttctg
ctcgccgtcgactttttctctctggtcatctggcagattgtggatcctttacatatcaca
gtggagaagttcacccgagaagccccgaaaggagacctggatgttctaatccaaccgtta
ttggagcattgcagttctgaaaaaatgaacacctggctgggcgtggtgtacgcttacaaa
ggcttgctgctgctgctcggcatcttcctggcttacgaaaccaagtcggtgtccacggag
aaaatcaacgaccaccgagctgtgggcatggccatctataatgtggctgtgctgtgtttg
atcaccgcccccgtcaccatgatcctgtcctctcagcaggacgcctcgttcgcctttgcc
tccctggccatcgttttttccgtctacatcaccctggtggttctgtttgttcccaagatg
cgtcggctgatcacgaggggtgagtggcaatccgatgctcaggagaccatgaagaccggt
tcgtccatgaacaacaatgacgaggagaaatccaggcaactggagagagaaaacaaggag
cttcagaagattatacaagaaaaagaagaacgcgtatcagagctgaggaaccagctgtct
gagcgacaggcccttcgatccaggagaaggcatccaccgtctccaatcaaaacaacagcg
cagttgcccaagtgggcatgcccgccaccgacccccgatccttggccccgccgccgggct
accctgcgcccgttcctgatctgcacgccgtcccgccgtccttcggcaattcctccagcc
tctaccggcccgacggcaaaacgggccgcaataactgtcacgccagccggctgcagatgc
tctacaaatgagctgaacggaagccaccgcttttcctga
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