Syngnathus scovelli (Gulf pipefish): 125986698
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Entry
125986698 CDS
T08785
Symbol
trit1
Name
(RefSeq) tRNA dimethylallyltransferase isoform X1
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sscv01006
]
125986698 (trit1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sscv03016
]
125986698 (trit1)
Enzymes [BR:
sscv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
125986698 (trit1)
Prenyltransferases [BR:
sscv01006
]
Compound prenylation
tRNA dimethylallyltransferase
125986698 (trit1)
Transfer RNA biogenesis [BR:
sscv03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
125986698 (trit1)
Prokaryotic type
125986698 (trit1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IPPT
zf-C2H2_jaz
IPT
zf-met
AAA_16
AAA_33
nSTAND3
PPV_E1_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
125986698
NCBI-ProteinID:
XP_049606465
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Position
19:complement(1412604..1427658)
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AA seq
442 aa
AA seq
DB search
MAASTRCMKRALAGAISPSLVVILGATGTGKSKLAIEIGKRLRGEIISADSMQVYHGLDI
ITNKVTAEERAQCLHHMIGFVDPLVSNYTVVDFRNKAVSLIDDMHHQNKLPIVVGGTNYY
IESLLWRVLLDAGRDDLEGDGDTDRKLELEKLEGAELHKRLMEVDPKMAAMLHPNDKRKI
ARSLQIHQETGVPHSSWLEEQRDQQGGAALGGPLRYPDPCIFWLHADMNALDKRLDARVD
EMLSTGLIEELRDFHVRFNQQKVRNDSQNYQHGIFQSIGFKEFHDYLTAPENSTQQEKDA
LRKKGVEALKIATRRYARKQNKWVRNRFLKRPGDSVPAVYGLDVTDVARWEETVLNPALQ
ILDSLCKGEEPAVPPIRLQGEEQRNKRSRHTCDLCDKVIIGDLEWAAHLKSKKHHFHVRK
KLKSDAETKRSESSSQDTNSEH
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccacacgctgtatgaagcgtgccttggcgggagcgatttcgccgtctttg
gtggtcattttaggagccactggtaccgggaaatcaaagttagccattgagatcggaaaa
cgacttcggggagagatcattagcgccgattccatgcaggtgtaccacggtctcgacatt
atcacaaacaaagtgacggccgaggagcgcgcccagtgcctccatcacatgatcggcttt
gtggacccgttggttagcaactacacggtggtggacttcaggaacaaagctgtttctcta
atcgatgacatgcatcatcagaataaactgcccatcgttgttggaggaacaaattattac
attgagtccctgctgtggcgagtcctactcgacgctgggcgggacgatttagagggggat
ggagacacagacaggaagttggaactggagaaactggaaggagccgaactacacaagcga
ttgatggaagtggaccccaaaatggccgccatgttgcaccccaacgacaagcgcaaaatt
gccagaagcctgcagatccaccaagaaacaggcgttcctcacagttcatggctggaggag
cagcgagaccagcagggcggcgccgctctggggggtccgctaaggtacccggacccttgc
atcttttggctccatgccgacatgaacgctctggacaagcgcctggacgctcgtgtcgat
gagatgttgtcaaccggcttgatagaggagctcagggacttccatgtccgcttcaatcag
cagaaagtgcggaatgacagtcaaaactaccaacacgggatcttccagtcgatcggtttc
aaagaattccacgattacctgacggctcccgaaaacagcacccagcaggaaaaagacgca
ctccgaaaaaaaggtgttgaagctttgaagattgcgacgcgacgctacgctcgcaagcaa
aacaaatgggtccgtaaccgcttcctcaaacgacccggagacagcgtgccagcagtgtac
ggcttggatgtgacggatgtggcgagatgggaggagacggtgctgaaccctgcactgcag
atactggacagtctctgcaagggtgaggagcctgctgttccaccaatcaggcttcagggg
gaggagcaaaggaacaaacgaagccggcacacctgcgacctttgcgacaaagtgatcatc
ggcgacctggagtgggccgctcacctcaagtccaagaagcaccacttccacgtcaggaag
aagctcaagtccgatgccgagacaaagcggtcggaatcctcctcacaggacaccaactca
gaacactga
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