Syngnathus scovelli (Gulf pipefish): 125986856
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Entry
125986856 CDS
T08785
Symbol
pou2f2a
Name
(RefSeq) POU domain, class 2, transcription factor 2
KO
K09364
POU domain transcription factor, class 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125986856 (pou2f2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125986856 (pou2f2a)
03021 Transcription machinery [BR:
sscv03021
]
125986856 (pou2f2a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
125986856 (pou2f2a)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
125986856 (pou2f2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
125986856
NCBI-ProteinID:
XP_049606726
LinkDB
All DBs
Position
19:6434947..6470035
Genome browser
AA seq
741 aa
AA seq
DB search
MFVPLPVPFVFQRTASDFSAWRLKSSLAPRSSPDIRMSKAEEEKAGSDYPADGSGSNRNS
PHDQPMESSPFSLSPTPGSKVKAEGSCEMTCSAVLPSSQQQQQQQQQQQAQAQAQHHHTQ
LMLAGSQLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAHAAHAAHAAAQQQQHQ
SQTSQQQQQQAAKQEMTVQAPPPQLALSQPIQLTAQDIQQLLQLQQLVLMPGHPLQSPAQ
FLLSQPPPQTQQQQQQALLSTANLIQLPQQSSTGLLTTTPRLSLQAQQREKSSDGAGNIS
APPASTGISGMGSAAVGSSSGSAAAMAASLNSALTAGSHAGHLGEEPSDLEELEQFARTF
KQRRIKLGFTQGDVGVAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLGDAET
MAVDSMLPSPSSISSPLLGLEGLAGRRRKKRTSIETNVRVALERNFSTNQKPTSEEILLM
AEQLNMEKEVIRVWFCNRRQKEKRINPASSSTPPLPGQTSPAVTHKAPCYSPHMISSPGI
SQGSSSLSTTAAALSPSPVSSVAAGSTSSSLTPPPHSTASPAPPGLGSHGLNTGNTMMGV
STGMNQALMSSNPLATMQAALAASGGQLSIMEASAGHMILGSGPGGVPHSLRPSLFLNRP
GLLPMATGAISMVTASPPTMGLVSGPGGGAPRLAFAQSSPAGAAHLLGPPSGPEDSPCSS
PASFCSFSEASPPPLGGAMAE
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccccctgccggtgcccttcgtctttcagagaactgcgtccgacttcagcgcc
tggagactcaagtcgtcgctggctccgcggtccagccccgatatcaggatgtccaaagca
gaggaagagaaggccgggtcggactatcccgccgacggctcaggctctaacagaaacagt
ccacatgaccagccaatggaaagcagcccgttcagcctctcgcccacaccaggcagcaag
gtgaaggcggaagggagttgtgagatgacctgcagcgctgtgctgccatcttctcagcag
cagcagcaacagcagcagcagcagcaggcacaagcgcaggcgcagcaccatcacacgcag
ctgatgctggctggcagtcagctggcggggctggctgcactcctgccggcccaacaacag
ctgctcctgcagcaggcccaagctcagctcctggcggccgctgtccagcagtccaatgct
gcacacgctgctcacgccgcgcacgctgctcatgccgccgcccagcaacagcagcaccag
agccaaacatctcagcagcagcaacagcaagccgccaaacaggaaatgactgttcaagct
cctccaccgcagctggccctctctcagccaatccagctcacagcgcaggacatccagcag
ctgctccagctccaacagctggttctcatgccaggccacccgctccagtccccggcccag
tttctcctgtcgcagccacccccccagactcagcaacagcagcaacaagctttgctctcc
acagcaaatcttatccagctacctcagcaaagctcgacgggcctattgaccacgacgccc
cgcctcagcctccaggcgcagcagagggagaaaagcagcgatggtgccggaaacatcagc
gccccaccagcgtccacgggcatcagcggcatgggctcggcggcggtcgggtcttcgtcc
ggctcggccgccgccatggcagcctccctgaactcggccttgacagccgggagccacgct
ggccacctgggggaggagcccagcgacctggaggagctggaacagtttgctcgcacgttc
aagcagcgacgcatcaagctgggattcacacagggcgacgtgggcgtcgccatggggaaa
ctgtacggcaacgacttcagccagaccaccatctcgcgctttgaggccctcaacctgagc
ttcaagaacatgtgcaagcttaagcctctgctggagaagtggctcggggacgcagagacc
atggcagtggacagcatgctgcccagcccctcttccatctcctcccccctgctgggcttg
gagggcctggcgggccgacgccgaaagaagcgcaccagcatcgagaccaacgtgcgcgtg
gcgctggagcgcaacttcagcacgaaccagaagcctacctcggaggagatcctactgatg
gcagaacagctcaacatggagaaggaggtgatccgcgtgtggttctgcaaccggcggcag
aaagagaagcgcatcaaccccgccagcagcagcacgccgccgctgccgggccagacctcg
cccgccgtcacgcacaaagccccctgctacagcccacacatgatatccagtccaggtatc
tctcagggcagcagcagcctcagcacaacagctgccgctttgtcaccgtcgcccgtcagc
tctgtggcagcaggttccacctcctcttctttgactccgccccctcatagcacagccagc
cccgcccctcctggtctgggttctcacggcctcaacaccggaaacacaatgatgggagta
agcacaggaatgaaccaggcgctcatgagcagcaatccgctggctaccatgcaagcagca
ctggcagccagcggtggtcagctgtcaatcatggaggcaagtgcgggtcacatgattctg
ggcagcggccctggcggggtaccgcattcgctgcgcccctcgctcttcctcaaccgcccg
ggcctgctgcccatggcgacgggcgccatctccatggtgacggcgtccccgcccaccatg
gggctggtgagtggcccgggagggggcgcgccccggctggccttcgcccagtcttcgccc
gccggcgccgctcacctcctgggcccgccctcgggcccggaagactcgccctgctccagc
cccgcttccttctgttccttcagcgaagcctcgccgccgcccctgggcggggctatggcc
gagtga
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