Syngnathus scovelli (Gulf pipefish): 125986953
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Entry
125986953 CDS
T08785
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125986953 (vps50)
Membrane trafficking [BR:
sscv04131
]
Protein recycling
Others
EARP complex
125986953 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
125986953
NCBI-ProteinID:
XP_049606875
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All DBs
Position
19:complement(2767123..2804414)
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AA seq
993 aa
AA seq
DB search
MQKIKSLMARQGLKSPPDSMADLSPVENFRIPSKEELRELREQPIDPQAEQEIIDSIEEI
YFSNDSFDMVQHELEKLPTELNLLELEEYRDRLKRQQAAVSKKVADLILEKQPSYVKELE
RVTALQTNLQLAAVICTNARRQLSVSKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVAHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDKQVTTPTPDD
AVATQSDELGIDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSHFKYDDFIVVLDVIS
RLMQVGEEFCSSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNI
SQLHEFKFMDQCRSPPLSPSRQGASSAFQIQEELSLFQKYLQDGNPFEMHIEQKEEETED
VLASNGYESDELEKSAYQDYDSDSDVPEELKQDYVDEQTGDVPLKSASRETIRSKKRSDY
NLNKTNAPILTNTTLNVIRLVGKYMQMMSILKPIAFDVIHCVSQLFDYYLYAVYTFFGRN
DMPVPSPSLPTHGGRESGTARMVGPACLYESSGLGLISSRLRTTLNRIQENLIDMEAGGE
NPALHASTEDRKEKVPSPHLSQMVVLTNSGTLYGLAQRVVATESLVFLAEQFESLQSHLD
TMMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMSGVKWDIKEIMSQ
HNMYVDVLLKEFEMFNTRLDDISRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSN
EGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQ
LANLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagataaagtctctcatggcccggcagggtctaaaaagccctcccgacagcatg
gcagacctcagtcctgtggagaactttaggataccaagcaaggaagagttgcgggagctc
agggagcaacccatcgaccctcaggccgagcaagagatcatcgacagtatcgaggagatc
tacttctctaacgactcttttgacatggtgcagcatgaactggagaaactcccgaccgag
ttaaacctgctggagctggaagagtaccgagacagactgaagagacagcaggcagctgtt
tcgaaaaaggttgctgatctcattctggagaaacagccatcttatgtcaaggagctggag
agagtgacggcgttgcagaccaacctgcagctggcggctgtcatttgtacaaacgcaaga
cggcaactgagtgtgtcaaaggagggattcacagaagcgagcttgggcttattagctaat
cagagaaggcggcagctcctaacaggcctgctcaagtctcttcggaccatcaagacactg
caaagaacggacgtgcgactcagcgaaatgctcgaggaggaagactatcctggcgctatc
cagctctgtctggaatgtcagaaggctgccagcacgttcaaacactacagctgcatcagt
gaattgaattctaaactgcaagacactctggagcaaatagaggagcagcttgacgttgcc
ctctcaaagacttgcaaacactttgatgttgcacactatactaaggtccagctggcctac
acactgctggggaagacacagacggctatggaccagctccacatgcacttcacccaagcc
atccacaatactgtgttccaagtggtgctgggatacgtcgagctctgcgctggcaatgct
gataccaagtttcagaaaatgcagtataaggatctgtgtacgcatatcaccccagacagc
tacattccgtgtctgacggatctgtgcaaggcgttgtgggaggtgatgttgagttaccac
cgcacgatgcagtggcacgaggagcatgacaagcaagtgaccacacctactccagacgat
gcagtggcgacacaatctgatgagttggggatagaccgcagctacgtgaaaaagaagctg
gagcacggactgacacggatctggcaggatgtccagttaaaggtgaaggcctatatcctg
gggactgacatgtctcacttcaaatatgatgacttcatcgtggtattggatgtcatcagc
aggctgatgcaggtgggggaggagttctgtagcagtaagtcggaggtcttgcaagagtcc
attaaacgccagagcgtcaactacttcaaaaactatcacagggcacgactggaggagctg
cgtatgtttcttgagaatgaaacatgggaactttgccctgtcaagtcaaacttcaatatc
tcacagctccatgagtttaagttcatggaccagtgtcgctcgcctccgctttccccgagc
aggcagggtgcgtcctccgccttccaaatccaagaggaactgtctctgttccaaaaatac
ctgcaagatgggaacccctttgagatgcatattgagcagaaggaggaagagacggaggat
gttctggcatctaatgggtacgagtccgacgagcttgagaagagcgcttatcaggattac
gacagcgacagcgatgtccccgaggagctgaagcaggactacgttgacgagcagacggga
gacgttcctctcaagagtgcgtcccgcgagacgatacgaagcaagaagaggtccgattac
aacctgaataagaccaacgccccgattcttaccaacacaactctcaacgttatccggctc
gtcgggaaatacatgcagatgatgagtattctgaagccgattgcctttgacgtcatccac
tgtgtgtcgcagctctttgactactacctctatgctgtttacaccttctttggaagaaat
gacatgcccgtcccaagcccgtctttgccaacacacggtggcagagagtcgggtacggcc
cgaatggtgggccctgcttgtttgtacgaatcatcgggtctgggcctgatcagcagcaga
ctgcgaaccacgctgaaccggatccaggagaacctcattgacatggaggcaggcggtgaa
aaccccgctctgcacgcttccacagaggacaggaaggagaaggtaccgagcccccaccta
agccaaatggtggtcctcaccaacagcggcacgctttatggactggcacagagagtggtc
gccacagagtcccttgtgtttttggctgagcagtttgagtcgcttcaatcccatttggac
acgatgatgcccgctgccaagaagccttttttgcagcagttctattcccagaccgtgtct
acagccagtgaactgcggaaacccatttactggatcgtggcagccaaggccattgactac
gaacaaatgttgctcctgatgtctggcgttaaatgggacattaaagagatcatgtcccag
cataacatgtacgtggatgtgctcttaaaggagtttgagatgttcaacacgcggctggac
gacatctccaggcacgtgcgcatcccactgcctgtgtccaatgtcttgtgggagcactgc
atccgcttggccaacaggactctggtagagggttatgctaatgtgaagaaatgcagcaac
gaaggtcgagccctgatgcagctggacttccaacagttcttgatgaagttggagaagctg
actgacctcaggcccattcccgataaggagtttgtcgagacctacatcaaggcgtattac
ctgacggaaaatgatatggagcagtttatcaagaaccacagggagtactccatgaagcag
ctagcaaacctggtgaatgtttgtctgggctcccacataaacaagaaagcccgccagaaa
cttctggccgccattgatgacattgacagacccaagagatag
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