Syngnathus scovelli (Gulf pipefish): 125986986
Help
Entry
125986986 CDS
T08785
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125986986
04121 Ubiquitin system [BR:
sscv04121
]
125986986
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125986986
Membrane trafficking [BR:
sscv04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
125986986
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125986986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
Zn_ribbon_19
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
Rad50_zn_hook
C1_2
Motif
Other DBs
NCBI-GeneID:
125986986
NCBI-ProteinID:
XP_049606938
LinkDB
All DBs
Position
19:complement(530787..534467)
Genome browser
AA seq
297 aa
AA seq
DB search
MAEAAAATIQHRFFCHCCKRETQPLLPDFVCPGCKSDFIEEVEHDSRLLESSAPESSEDS
SSLFSELWQLLFMERSALLSHPPSSESEQDDGETLLSAQSHLPLVTPGNAEVRELQFLSQ
PGEERSPRPEQRPQVEGIVQHFLADLLTTNGNPSAAPAALSSMLQLYSNPADYAWGQGGL
DTVITELLGQLENAGPPPAEKSMISSLPTVCISQEQTDRRLECTICREEYSWGECVRKLP
CLHYFHSDCIVPWLELHDTCPVCRKSLDGVDNSLLLHASQSPEGRAVKTEQHGRRAV
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggccgccgcggcaacaattcagcaccggttcttctgtcactgctgtaagcgt
gaaacgcaaccccttctcccggattttgtctgccccgggtgcaagtctgactttattgag
gaggtggaacatgactccagactcttggagagcagcgcaccagagagcagcgaagactcc
agctcgttattctccgaactatggcagctgttgtttatggagcgctcggctctgctgtcg
cacccgccgtcatcggagtccgagcaggatgacggcgagacgttgcttagcgctcaaagt
catcttcctttagtgacaccgggcaatgctgaggtcagagagctacagtttctgtcccag
cctggggaggagaggtcaccccgacctgagcaaagacctcaagtggaagggattgtgcaa
cacttcttggccgacctgttgacaaccaacgggaaccccagcgctgcgccagctgcatta
tcgagcatgctgcaactgtactcaaacccggcggattacgcgtggggtcagggaggcctg
gatacagtcattacagagttgttaggacagttggagaacgcgggtccaccccctgccgaa
aagagcatgatctcatccttgccgacggtttgcatttctcaagagcaaacagaccgcaga
ctggagtgtacaatttgccgggaggagtattcatggggggaatgtgtccgcaagctaccg
tgcctccattacttccacagcgactgcatagtgccttggctggaactgcacgatacgtgt
ccggtgtgccgaaaaagcctggacggcgtggacaacagcctcctcctgcacgcatcccaa
tctccagagggtcgcgccgttaagacagagcaacacggccggcgggccgtctga
DBGET
integrated database retrieval system
