Syngnathus scovelli (Gulf pipefish): 125986997
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Entry
125986997 CDS
T08785
Symbol
igf2bp3
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 3 isoform X1
KO
K13197
insulin-like growth factor 2 mRNA-binding protein 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125986997 (igf2bp3)
03041 Spliceosome [BR:
sscv03041
]
125986997 (igf2bp3)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
125986997 (igf2bp3)
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125986997 (igf2bp3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
RRM_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
RRM_3
Motif
Other DBs
NCBI-GeneID:
125986997
NCBI-ProteinID:
XP_049606962
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Position
19:complement(2518142..2533571)
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AA seq
603 aa
AA seq
DB search
MNKLYIGNVSAEASEEDFETIFETWNIPHSGPFLVKSGYAFVDCPDEKTAMKAIDVLSGK
VELHGKLLDVEHSVPKRQRSCKLQIRNIPPDMRWEVLDGVLAQYGAVECCEQVNTDTETA
VVNVRYAAKDQARQAIEKLNGSMMENCALKVSYIPDETAAPEGPPSGGRRGFNARGPPRS
GSPSLGARPKVQSDIPLRMLVPTQFVGAIIGKEGATIRNVTKQTHSKIDIHRKENAGAAE
KPITIHSTAEGCSNACRTLMEIMQKEALDTKFTEEIPLKVLVHNTFVGRLIGKEGRNLKK
IEQDTGTKITISPLQDLTLYNPERTITVKGTIEACARAEEEVMKKIRESYESDMAAMNLQ
SNLIPGLNLNALGLFPSGTPGMGPSMSHVPPPGAGGSAFGWSPYGGEGPFWASMMSASSQ
PLAGHPESETVHLFIPALAVGAIIGKQGQHIKQLSHFAGASIKIAPAEGMDPKQRMVIIV
GPPEAQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLT
CAEVVVPRDQTPDENDQVIVKISGHFFACQLAQRKIQEILAQVRRQQQPKPAPGAQPPLP
RRK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaataagctatatattggcaacgtgagcgccgaggccagcgaggaggacttcgaaact
atctttgagacgtggaacattccccacagtggtccctttctggtcaaaagcggctatgcc
ttcgtggactgccccgatgagaagactgcaatgaaggcaatcgatgttctttcaggtaaa
gttgaactccatgggaaacttctcgatgtggaacactctgtgccaaaacgtcaaaggagc
tgtaaactgcagatcaggaacatcccgcctgacatgcggtgggaggtcttggatggggtg
ctggcccagtatggtgctgtagaatgctgtgaacaagtcaacactgacaccgagactgca
gttgtcaatgttcgatacgcagccaaggaccaggccaggcaggccattgagaagctcaac
ggctccatgatggagaactgcgctttgaaggtgtcttacatcccagacgagacggccgca
ccggagggtcctccctcgggaggtcggagaggcttcaacgctcgtgggccgccgcggtcg
ggctcgccgagtctcggcgcccggcccaaagtgcagtcggacatcccgctgcgcatgctg
gtccccacgcagttcgtcggggccatcatcggcaaggaaggcgccaccatccggaacgtc
accaaacagacgcactcaaagattgacattcacaggaaagagaacgcgggtgcggcagag
aagcccatcaccattcactccacagctgaaggttgttccaacgcctgcagaaccttaatg
gagatcatgcagaaggaagcactcgacacaaagtttactgaggagatcccactgaaggtt
ctagtgcacaacacttttgtgggaagattaatcgggaaggagggacgaaacttgaagaaa
atcgagcaggacacggggaccaaaatcacaatctcgcctctgcaggacctgaccctgtac
aacccggagcggaccatcaccgtgaagggcaccatcgaggcgtgcgccagagcagaggag
gaagtcatgaagaagatcagagagtcgtacgagagcgacatggccgccatgaacctccag
tccaacctgattccaggcttaaacttgaacgctctgggattgttccccagcggcacccct
ggcatgggtccatccatgtcccacgtccctcctcccggagccggcggctcggcgtttgga
tggagtccttatgggggcgagggtccattttgggcttctatgatgtcggcgagcagccag
cccctcgccggacacccggaatctgagacggtccacctgttcatccccgcgcttgccgtg
ggagccatcattggaaaacagggtcaacacatcaagcagctgtcgcattttgccggagcc
tccatcaaaatcgcccccgcggaaggcatggatcccaaacagaggatggtcattattgtg
ggaccgccagaggctcagtttaaggctcagtgtcgcatctttggcaagctgaaggaggag
aacttctttggaccaaaggaagaggtgaagctagaggcccacatcaaggtcccttccttc
gccgccggacgcgtcatcggaaaaggtggaaaaacggtaaacgagttacagaacctgact
tgcgctgaggtggtggtcccgcgggaccagactcccgacgagaacgaccaggtcatcgtc
aaaatcagcggacacttctttgcatgtcagctggcccaaaggaagattcaggagatcttg
gctcaggtgagaagacagcagcagcctaagccggcgcccggcgctcagccgccgctgccc
cgcaggaagtaa
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