Syngnathus scovelli (Gulf pipefish): 125987044
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Entry
125987044 CDS
T08785
Name
(RefSeq) voltage-dependent calcium channel gamma-6 subunit
KO
K04871
voltage-dependent calcium channel gamma-6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04260
Cardiac muscle contraction
sscv04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125987044
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
125987044
04261 Adrenergic signaling in cardiomyocytes
125987044
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125987044
Ion channels [BR:
sscv04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125987044
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GFIT
Motif
Pfam:
Claudin_2
PMP22_Claudin
UL45
Zona_CL1
Motif
Other DBs
NCBI-GeneID:
125987044
NCBI-ProteinID:
XP_049607084
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Position
19:complement(9194519..9198314)
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AA seq
317 aa
AA seq
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MTVLFELPFCPHQKAHVRRLTHMLTFFCFQILASMMWSTFLVTDEEGRAAGPAAAHSVGV
VGGGGGAQGMGGLAGLMSGRSTFGGNKRRRAGHHAMTEAQEGKIKLAFFVAIVGVILTVL
GVGTEFWVELAPPKSFYGNQTCPAMHFGLWKACSKTLWVADIDPDRESCGPAELPGESNC
TYFKFFTTGENTVMFHKTTHKSLSMASAMLSLFSVVLMAMGAICITMALSKEIVFFLKPA
SICFVLSGVLALLSLLVFQQSVLSLLASDHLVPLHHNFSWSASCVGCAGAILIVGGLLFL
LLALPFSPWQRCHSAAS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgactgttttgttcgagctgcctttttgtcctcaccaaaaggcgcatgtccgccgtttg
acgcatatgctgacgtttttttgctttcaaattttggcttcgatgatgtggtccaccttc
ctggtgacggacgaggagggccgtgcggcaggcccggccgctgcccactcggtgggagtc
gtgggcggcggcgggggagcccaaggcatgggcggcctggcgggcctcatgagtggacgc
agcacattcggcggcaacaaacgccgcagggccggacaccacgccatgacagaggcacag
gaaggcaagattaagctggcattcttcgtggctatcgtgggtgtcatcctgaccgtgctg
ggcgtgggaaccgagttttgggtggagctggcgccacccaagagtttctacggtaaccag
acatgtccggccatgcattttggcctgtggaaggcctgcagcaagacgctatgggtggct
gacatcgaccccgacagggagagctgcgggcccgccgagctgcccggagagtctaactgc
acgtacttcaagttcttcacaacgggcgagaacaccgtcatgttccacaagaccacgcac
aaaagcctgagcatggcgtcggccatgttgtcgcttttcagcgtggtgctgatggcgatg
ggcgccatctgcatcaccatggcactcagcaaggaaatagtcttcttcctcaagcccgcc
tcgatctgcttcgtcctttctggagtgctggcgctgctgtccctgctggtcttccagcag
tcggtattgtccctcctggccagcgaccacttggtgccgctgcaccacaacttctcctgg
tctgcgtcgtgcgtgggctgcgccggcgccatcttgattgtaggcgggctcctcttcctg
ctgctggcgcttcctttcagcccctggcagaggtgccacagcgccgccagctag
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