Syngnathus scovelli (Gulf pipefish): 125987056
Help
Entry
125987056 CDS
T08785
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125987056 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125987056 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125987056 (vps28)
Membrane trafficking [BR:
sscv04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
125987056 (vps28)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125987056 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
125987056 (vps28)
Exosomal proteins of colorectal cancer cells
125987056 (vps28)
Exosomal proteins of bladder cancer cells
125987056 (vps28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS28
DGT4
Motif
Other DBs
NCBI-GeneID:
125987056
NCBI-ProteinID:
XP_049607106
LinkDB
All DBs
Position
19:complement(8398185..8400779)
Genome browser
AA seq
224 aa
AA seq
DB search
MFHGIPVTGSMGGGSAPHKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIK
DCVTPNEYTGSCSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITI
KDDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKD
KVSRWLSTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatggcattccggttacaggcagcatgggaggaggatctgcaccccataaacct
gagctctacgaggaggtgaaattgtacaaaaatgcaagagaaagagaaaagtatgacaac
atggcggagttatttgctgttgtcaagaccttgcaggccttggagaaagcctacatcaaa
gactgcgtcacacccaatgagtacaccggctcgtgttccagacttttggtacagtacaag
gcggctttcaaacaggtgcagggctccgacgtgggctcaatcgacgacttttgccgcaag
tacagactagattgcccgctagccatggaaaggatcaaggaggatcggccaatcaccatc
aaggacgacaagggcaatttgaaccgctgcattgccgacatcgtttctctgtttatcacc
gtcatggacaaactgagattggagatcagagccatggacgagatccaaccggatctgcgc
gagctgatggagaccatgaaccgaatgagcaacatgcctcccgattcggaggctaaggac
aaagtcagccggtggttaagtaccctgagcagcatgtcagcctcagacgagctggacgac
agccaagtgcgccagatgctctttgacctggagtcggcctataacgccttcaaccgcttc
ctgcactcttcttga
DBGET
integrated database retrieval system
