Syngnathus scovelli (Gulf pipefish): 125987103
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Entry
125987103 CDS
T08785
Name
(RefSeq) homeobox protein Hox-A2a
KO
K09302
homeobox protein HoxA/B2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125987103
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
125987103
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Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
SARAF
DUF7645
Motif
Other DBs
NCBI-GeneID:
125987103
NCBI-ProteinID:
XP_049607172
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All DBs
Position
19:2321812..2324644
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AA seq
360 aa
AA seq
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MNYEFERESGFINSQPSLAECLTSFPPVADSFQSSSIKSSTLIPPPFEQTIPSLNPGSHP
RHGRPRHSPDGCSPLPTASLPPEYPWMREKKASKRNHLPTSTATTLSTNGPVCFSPKGSP
EVAEGGGISGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWF
QNRRMKHKRQTQSKENHNGDAGKGPGGGEDGMHSDDDDEGPPYEQSGALLERDTFSFHNN
NLESTQQVHNSSSASFAAAPLNSNEKNLKHFPNPSPTVPGCVSTMGPGSASVPDNGDSPP
ALDVSIHDFQAFSSDSCLQLSDAASPSLSESLDSPVDIAADTFYFFSESLTTIDLQNLNY
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgaattcgagcgagagagcggatttatcaatagtcagccgtcgcttgctgag
tgcctgacatctttcccccctgtcgctgattcatttcaaagttcatcaatcaagagctcg
acactgattcctcctcccttcgagcagaccatccccagcctcaacccgggcagccatccg
cgccacggccgcccgagacacagccccgacggatgcagcccgctgcccaccgcctcactg
cctccggagtatccgtggatgcgggagaagaaagcctccaagcggaaccacctgcccacg
tccaccgcaaccactttatctactaatgggcccgtttgcttctccccaaaaggctcgcct
gaggtcgcggaaggcggagggataagcggcggctcccgccggctgaggacagcctacact
aacacgcagttgctggagctggagaaggaattccacttcaacaagtatttgtgccgaccc
aggagggtggagatcgcggccctgctcgatctgaccgagcggcaagtcaaagtgtggttc
cagaaccggcgtatgaaacacaaacggcagacgcaaagcaaggagaaccacaacggggac
gcggggaagggtcccggcggcggggaggacggaatgcacagcgacgatgacgatgagggc
cccccgtacgagcaaagcggggccctgctggagagagacactttctcctttcacaacaac
aatctggaatccacgcagcaggtccacaatagcagctcggcgagctttgctgctgcaccg
ctgaacagcaatgagaaaaatctgaaacattttcccaacccgtcacccactgttcccggc
tgcgtgtcaacaatgggcccaggctcggcatccgtgccggacaatggcgacagtccccca
gctttggatgtttctatacacgacttccaagctttctcgtcggattcctgcttgcaactc
tccgacgctgcctcgccgagcttgtctgaatcgctggacagtcccgtggacattgctgca
gatactttctattttttctcggaatctctaacaacaatcgacctgcaaaatctcaattat
taa
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