Syngnathus scovelli (Gulf pipefish): 125987162
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Entry
125987162 CDS
T08785
Symbol
abcf1
Name
(RefSeq) ATP-binding cassette sub-family F member 1 isoform X1
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sscv03012
]
125987162 (abcf1)
Translation factors [BR:
sscv03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
125987162 (abcf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_18
AAA_28
AAA
NACHT
AAA_24
AAA_14
ABC_tran_Xtn
AAA_15
AAA_22
RsgA_GTPase
AAA_5
NB-ARC
cobW
ATP-synt_ab
AAA_23
Motif
Other DBs
NCBI-GeneID:
125987162
NCBI-ProteinID:
XP_049607251
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All DBs
Position
19:complement(348890..355088)
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AA seq
818 aa
AA seq
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MPKKGQEEAEWVGDEDQPTTEKAVKKGKKDKKGKKSFFEELQTEEKPEKEVKVPAKDAKQ
PHKKKKDRRKDKGEDAGKDSDEDVMLKFKKLSAQASDEEDEPVVAPRKGNKKNKGGNIFA
ALSQGMSGEEDNSDLDQQEEPVKKEAEKGKRKEKAKAKVKLPENDEDEKPKDKMKAIKKT
PVEKSHHDEDEGDNSDDDDMMMSAEDVIAEQAKQQQQDDDPFSNLSKKEKKKKKKMMEYE
RQVASLRAQNALEGDFSISQAEMSSRQAMLENASDIKLERFSISAHGKELFVNADLLIVA
GRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQEVVADDTPAVQAVLKADTRRL
KLLQEEKQLQARLEKGEDSVADRLDKVYEELRVIGAAAAEAKARRILAGLSFTPEMQNRP
TKRFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVIWLNNYLQGWKKTLLIVSHDQ
SFLDDVCTDIMHLDNQKLYYYRGNYLTFKKMYVQKQKELQKQYDKQEKKLKDLKAGGKST
KQAEKQTKEALTRKQQKGKKKGGQEEESHEATELLKRPKEYTVKFTFPNPPPLSPPILGL
HSVDFSYDGHKPLFRNVDFGIDMESRICIVGPNGVGKSTLLLLLNGKLNPTKGEMRKNHR
LKIGFFNQQYADQLNMEENPTEYLMRNFNLPYQDGRKCLGRFGLESHAHTIQISKLSGGQ
KARVVFAELSCRQPDVLILDEPTNNLDIESIDALSEAINEYKGAVIIVSHDARLITETQC
QLWVVEDYSVNQIDGDFDDYKREVLESLGETMVNKVNP
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagaaaggacaagaagaagcagagtgggtgggcgatgaagatcagcctacaaca
gaaaaggctgtgaaaaaggggaagaaagataaaaaggggaaaaaaagttttttcgaggaa
ctccagacagaggagaaacctgaaaaagaagttaaggttcctgccaaagatgcaaaacag
cctcataaaaagaaaaaggaccgccgtaaagacaaaggtgaagatgcgggcaaggacagc
gatgaagatgtcatgctgaagtttaaaaagctctcggcgcaagccagtgatgaagaagat
gaacctgttgttgcccccaggaaaggaaacaagaagaacaagggtggtaacatttttgca
gctctcagccagggtatgagtggtgaggaagacaattcggatttggaccagcaagaggaa
ccggtcaaaaaggaggctgagaagggcaagagaaaagagaaagctaaagctaaggtgaag
ttaccagagaacgatgaggatgagaaacccaaggacaaaatgaaagcaattaaaaagaca
ccggtcgagaaatcgcatcatgatgaagacgagggagataacagtgacgatgacgacatg
atgatgagtgctgaagatgtcatcgccgagcaggccaaacagcagcagcaggacgatgac
cccttttctaaccttagcaagaaggagaaaaagaagaagaaaaaaatgatggagtatgag
cgtcaagtggcaagtctccgtgcccagaatgccttggaaggggatttctccatttcccaa
gctgaaatgtcctccagacaggccatgctagagaacgcgtctgacatcaagctggagagg
ttcagcatttctgcccatggcaaagagctttttgtcaacgctgatctcctcatagtggca
ggaagaagatatggtttggtcggaccaaacggcaaagggaagaccacattgctgaaacac
atcgccaacagagctctgagcattccccccaacatcgacgtgttgctatgcgagcaagag
gtggtggctgacgacacgccggcagttcaggcggtgctgaaggccgacactcgccgcctg
aagctgctccaggaggagaagcagcttcaggctcgtctggagaagggagaggacagcgtg
gcggacagactagacaaggtctacgaggagctgcgggtgatcggagctgcggcggccgaa
gccaaagccagaaggatcttggccggcttgtcctttacccccgagatgcagaaccgaccc
accaaaaggttctcgggaggttggagaatgagagtttcgcttgccagggctctgttcatg
gagcccaccttactgatgcttgacgaacccaccaaccacctggacctgaatgccgtcatc
tggctcaacaactatcttcaaggctggaagaaaaccctgctcatagtttcccacgaccaa
agtttcctcgatgacgtgtgcactgacatcatgcacctagacaaccagaagctctactac
tacagaggcaactacttgaccttcaaaaaaatgtatgtccagaagcaaaaggagctccag
aaacaatacgacaagcaggagaagaaacttaaggacctgaaagctggtggcaagtccacc
aaacaggctgagaagcagacaaaagaagcgctcaccagaaaacaacagaaaggcaagaag
aaggggggtcaggaagaggagagccacgaggccacggaactgctgaagcggcccaaagag
tacactgtcaagttcacctttccaaaccctcctcctctttcgccacccattttgggcctg
catagtgtcgatttctcctatgacggccacaagccactcttcaggaatgtcgactttgga
attgacatggaatccagaatttgtatcgttggcccgaatggtgttgggaagagtacattg
ctgttgctgctcaacgggaaattaaatcctaccaagggtgagatgaggaagaatcatcga
ttgaaaatcggcttcttcaaccagcagtatgcagatcagttgaacatggaggagaacccc
acagagtacctgatgaggaacttcaacctcccctatcaggatggcaggaagtgcctggga
cgttttggcctggagagccacgcgcacaccattcaaatctcaaaactgtctggtggtcag
aaagctcgagttgtgtttgctgaactatcctgccgccagccagatgtcctcatcttggat
gaacccactaacaatctggatattgagtccattgatgctttatcagaggccatcaatgaa
tacaaaggagctgtgatcatcgtgagtcacgacgcccgtctcatcactgaaactcagtgc
cagctgtgggtggtggaagattactcggtcaaccagatcgacggcgactttgacgactac
aagcgagaagttctcgagtccctcggcgagaccatggtcaataaggtcaacccgtga
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