Syngnathus scovelli (Gulf pipefish): 125987209
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Entry
125987209 CDS
T08785
Symbol
zbtb22b
Name
(RefSeq) zinc finger and BTB domain-containing protein 22b
KO
K10502
zinc finger and BTB domain-containing protein 22
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125987209 (zbtb22b)
04121 Ubiquitin system [BR:
sscv04121
]
125987209 (zbtb22b)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
125987209 (zbtb22b)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
125987209 (zbtb22b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
Zn_ribbon_SprT
C2CH-4th_BIRD-IDD
DUF5810
zf-C2H2_jaz
BTB_BTBDG
DUF2321
RPA43_OB
Motif
Other DBs
NCBI-GeneID:
125987209
NCBI-ProteinID:
XP_049607379
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All DBs
Position
19:5665943..5670299
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AA seq
646 aa
AA seq
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MQSASAEVGSSADSVVQVCFPSSQASVLDGLNQQREEGRLCDLSIHVQGHVFKAHRCVLA
ASSSYFHDQVLLKNMSSVSIPAVMDPLAFESVLRCAYTGQLTMLREDIVNYLTVGSVLQM
WHIVDKCTELLKEGRTVGGGSSGGSTNGGVLSRDTVRPAGSQDSHCSYANVERSLQEPSR
TSQPPSRLSASESQSPSSTNYFSPGAATNLAGGGGVASNTPSYCTPSGEEALMLEEREEE
EEDDEGEEEEVYQQKLRGGGRMKKLEEEVGVSDSFGVSSYQDGEDVSLQRRPAYIQPSIM
PRKQWVVVKAERPEDHDLIVVSGEEGGGADDEEDEEEEDDERGMASGRGRDGGDFAISHV
RTLSVEAAEGVEADAQMDYSQSSDDFLKLDGSLLDAALAQQVQDSTVGPNPSQGANRAAS
GLLGQVPTRTQLFPLDMQGNQILVFGQTSALSMDAGPPPMSGVIGGGAAFKSVAHGPAVS
GSDGGGGGGGSAKVFMCHCGKTFTHKSMRDRHINMHLDLRPFHCPVCAKKFKMKHHLTEH
MKTHTGLKPYHCAGCGKKFMWRDSFMRHRSHCQRRGGGSGGDIVDVLPGPHLLLPPGEGG
LRGGGTSSTSRLHHVANGASSGSSMAATIFGSLPLEHECTDLSNDS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggcttctgcagaggtgggcagcagcgccgactctgtggtgcaggtgtgcttc
ccgagctcccaggcctcggtactggatggcctgaaccagcagagggaggagggtcgctta
tgtgacctttccatccacgtccaaggtcacgtgtttaaggcccaccgctgcgtcctggcc
gcctcctcatcgtatttccatgatcaggtcctgctgaagaacatgtccagcgtgtctatc
ccggccgtgatggacccgctggcctttgagagcgttctgcgctgcgcctacacaggtcag
ctcacgatgctgcgcgaggacatcgtcaactacttgacggtgggcagcgtcttgcagatg
tggcacatcgtggacaaatgcaccgaactccttaaggagggcaggactgttgggggaggt
tcgagcggcggctcaactaatggcggcgtcctcagtcgagatacagttcgcccagcgggc
tcccaagactcacattgttcctacgcaaatgtggaaaggagccttcaagagccctcacga
acctcccagccaccaagccgtctgtcggccagcgagagccagtctcccagcagcaccaac
tacttcagccccggagcggccacgaacttggcgggtggcggcggagtggccagcaacacc
cccagctactgcacgccatccggagaggaggccctcatgttagaagagagagaggaggag
gaggaggatgacgagggggaagaagaagaggtttaccagcaaaagttgagaggaggaggc
aggatgaagaaattggaggaggaagtgggcgtcagtgacagttttggggtttcctcatat
caggacggcgaggacgtgtcgctgcagagacgccccgcctacatccagcctagcatcatg
cctcgcaagcagtgggtggtggtcaaagctgagcggcccgaggaccacgacctcatcgtg
gtgtcgggcgaggagggcggcggggcagatgacgaagaagacgaggaggaggaggacgac
gagagggggatggcgtccggccgagggagggatggcggcgacttcgccatctcgcacgtg
cggacgctctcggtggaggctgccgagggagtggaggctgacgcacagatggactacagc
cagtcttccgacgacttcctcaagttggatggcagcttgctggatgctgctttagctcag
caggtccaagactcaacagtgggacccaatccgagccaaggcgccaatcgagctgcctca
ggcctgctgggtcaggtcccgacccgcacccagcttttccctctagacatgcagggcaac
cagattctggtcttcggacaaacatctgcgctctcgatggatgctgggccgcctcctatg
agtggggtgatcggcggcggcgccgctttcaaaagtgtggcgcacggcccggcggtctca
ggaagcgacggcgggggtggtggcggcggttcagctaaagtctttatgtgccactgcggc
aagaccttcacacacaagagcatgagggaccgccacatcaacatgcacctggacctgaga
cccttccactgtcccgtgtgcgccaagaagttcaagatgaagcatcacctgaccgagcac
atgaagacgcacacggggctcaagccgtaccactgcgccggatgcggcaagaagttcatg
tggcgagacagcttcatgaggcatcgatcgcactgccagcgtcgaggaggaggaagcggc
ggagacatcgttgatgtccttcccggccctcacctcctcctcccgccaggtgaggggggt
ttgcgaggaggtggcacgtcctctacctcacgcctccatcacgtcgctaacggagcttcg
tcgggaagcagcatggcagcgacgatttttggcagcctgccgttagagcacgagtgcacg
gatctttctaacgacagctaa
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