Syngnathus scovelli (Gulf pipefish): 125987210
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Entry
125987210 CDS
T08785
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1 isoform X1
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125987210
Ion channels [BR:
sscv04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
125987210
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
125987210
NCBI-ProteinID:
XP_049607381
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Position
19:complement(5222270..5227911)
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AA seq
634 aa
AA seq
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MERSSTSMVNISLVDECEVEEQRSLLPPARTLSPRRACPPQCGICPAVQRCADRTVWLDR
TQAMATMPLYNGHRCTRAPPCSPRRADKVKCKEKKRQRKEHKAKASGAPRIQVCTLNDGS
PFKTSARPSVQSLQWQEMSQSLPEIIVTSRDDEPPQESPPSQDRGPLPGAPCHSDPKHKT
ESKDDHYWKTHSIGWRLLRRRALFLRRQRLNDCALAVGIFGVFMMVTETELSWSVYSKSS
IYSLTLKSIISLSTILLLGLIIAYHCCEVQLYVHDSSAEDWRIAMTTERLTLIALELAAA
AIHPYPVGLVAYIQQQKVQTALSETELEIVLALPMFLRLYLLGRAMMLHSRLFTDTASRS
IGALNKIHFNARFVGKTLMTTYPGTVLMIFSVSLWIVAAWGLHVCERHHNYRDLSSNYME
ALWMVSVTFLSIGYGDVVPHTYCGRSICLLTGIMGAGCTVLVVAVVARKLELTRAEKHVH
NFMIDSHISKRMKNAAANVLRETWFIYKHTKLSREKDHTMVRMHQRKLMLAIHQLRRVKM
DKRILADQGSTLVDLCKVRELQTALFDVLVEVQGCRAELDTHVHGLEKHVEELREGFRGL
MPLLTSTLSTQNSSIRHLLREREKTDAAGRNEER
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggagcgctcctccacctccatggtcaacatttccctggtggacgaatgcgaggtggag
gagcagcgttcgctgctgcctcccgccagaacactctccccccgccgggcctgccctccc
cagtgcggaatctgcccggccgttcagaggtgcgcggatcgcacggtgtggctggaccgg
acccaagccatggccaccatgcctttatacaacggccaccggtgcacccgagccccgcca
tgctcccccaggagggccgacaaagtcaaatgcaaggagaaaaaacgtcagaggaaggag
cacaaagccaaggcttctggagctcccagaatccaggtctgcactttaaatgacgggtcc
cccttcaaaacctccgccaggccctcggtccaaagcctccagtggcaggagatgagccag
agcctcccggagatcatcgtcaccagcagggacgacgagccgccccaggaatcgcccccg
agccaggatcggggtcctctaccgggggcgccctgccattccgaccccaaacacaaaacg
gagtccaaggatgaccactactggaagacgcacagcatcgggtggcggctgctgcgtagg
agggcgctcttcctccgcaggcagcggcttaacgactgcgctctggccgtggggattttt
ggcgtgttcatgatggtcacggaaacggaactctcttggagtgtctacagcaagagctcc
atctactcactcacactcaaatccatcatcagcctttccaccatccttctgctgggcctc
atcatagcgtaccactgctgcgaggtgcagctctacgtccacgacagcagcgcggaggac
tggcgcatcgccatgacgacggagcggctgaccctgatcgccctggagctggcggcggcg
gcaatccatccgtacccggtgggcctggtggcctacatccaacagcagaaggtgcagacg
gcgctatccgagacggagctggagatcgtgctggcgctgccaatgttcctcaggctttac
ctcctgggccgcgccatgatgctacacagcaggctcttcaccgatacggcgtcgcgtagc
atcggggcgctcaacaagatccacttcaatgcccgcttcgtgggcaagaccctgatgacc
acctatcccggcaccgtgctgatgatcttcagcgtctcgttgtggatcgtggcggcctgg
gggctgcacgtatgcgagaggcatcacaactacagggacctaagcagcaactacatggag
gccctttggatggtgtcagtcaccttcctgtccatcggctacggagacgtggtgcctcac
acctactgcggacgcagcatctgcctcctcaccgggatcatgggggccggctgcaccgtc
ttagtggtggcggtggtggccaggaagctagagctgacgcgggcggagaagcacgtgcac
aacttcatgattgactcccacatctccaaaaggatgaagaacgcggcggcaaacgtgctg
agggagacttggttcatctacaagcacaccaagctctccagggagaaagatcacaccatg
gtccgcatgcaccaacgcaaactgatgctcgccatccaccagctccggcgcgtcaagatg
gacaagcgaatcctagcagaccagggcagcacactggtggacctctgcaaggtgagagag
ttacaaacggcgctgttcgacgtgctggtcgaggtgcagggctgccgggccgagctggac
acgcacgtccacggcctggagaaacacgtggaggagctgcgcgagggcttccgaggcctc
atgccgctgctgaccagtaccttgtccacgcagaattcatccatacgccacctgctgcgt
gagagggagaagacagacgctgctggaaggaatgaggagcggtag
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