Syngnathus scovelli (Gulf pipefish): 125987235
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Entry
125987235 CDS
T08785
Name
(RefSeq) tapasin
KO
K08058
TAP binding protein (tapasin)
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125987235
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Gene cluster
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Motif
Pfam:
V-set
Ig_3
ig
Ig_2
C1-set
Ig_6
Herpes_gE
Motif
Other DBs
NCBI-GeneID:
125987235
NCBI-ProteinID:
XP_049607440
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Position
19:5645909..5649041
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AA seq
432 aa
AA seq
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MTNFWSIPNVFLLSCLVQACHSHSCPGLECWYMNEKPSGGLAAPPSQVKSLLRIKTKGHR
TASLEDLTDPSILRVYTVADPAATLCHRSRKSSTRKPHCELSRFQPQYSAISWASTLSDE
LSPIYLQADWFSATVQDLDERRGTASIMRAPTETNELDVVLSVTTTTVVQSRLGEPVLLQ
CQFWANPASPLYGSGFAVEWRYQSHGSGRLLLAYDGKSDRLFDSPEEGVKMDFEDLHQNG
NASLVLQEAQVHHSGMYICMVYLPHLLAQVTIHLEVAEPPSLSIHPSPLPLTAPGQTLTV
HCEASGFAPHSLELSWDLKDADGKTRSLGSGHLTGHKQAWDGTYSQGTRLELNTSDPELG
RGGELICVAEHPGGTRRASVALRVIGFSTPSMEDSMVMMAVALVLYGLIKFISWLFLPSG
PAEAVETEKKKN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatttctggtccattcctaatgtctttctgctttcctgcttggtccaagcctgc
cacagccactcctgtcctgggctggagtgctggtatatgaacgaaaagccatctggaggt
ctagcggcgcccccaagccaggtgaagtcgctgcttcgcatcaagacgaaaggccaccgc
acagccagcctcgaagatttgaccgatcccagtatcctgagagtctacactgtcgccgat
ccggcggcgactttgtgtcaccgctcgcgcaaaagttcaacccgcaagcctcattgtgag
ctcagccggttccagccgcagtactccgccatctcgtgggcctccaccctctcagatgag
ctcagccctatatacctgcaagccgactggttttctgccactgttcaggacctggacgaa
cgacgcggcacggccagcatcatgcgtgcccccaccgaaaccaacgagctggacgtggtt
ctcagcgtgactaccacaacggtggtgcagtccagactcggtgagccggtactgctgcaa
tgccagttctgggccaaccccgcatctcccctgtatggatcgggctttgccgtggagtgg
cgctaccagtcccacggcagcggacgactgcttctggcctatgatggaaaatcggaccgg
ctatttgactccccggaggaaggcgtgaaaatggactttgaggatctgcaccaaaatggc
aacgcctccctggtgctgcaggaagcccaagtgcaccactccggaatgtacatttgcatg
gtgtacctgccacatcttctcgctcaggtcaccattcatctggaggttgcagaacctcct
tccctatccatccacccatccccgttgccccttaccgctccgggccagactctgacggtc
cactgtgaggcctcaggtttcgccccccattccctggagctgagctgggacttgaaagac
gccgatggcaagaccagatcgttgggatccggtcaccttacgggccacaagcaggcctgg
gacggcacctacagccaaggcacccggcttgagctcaacacgtctgatccggagctgggc
cgcggaggggagctcatctgcgtcgccgaacatcccggcggtacacgtcgtgccagcgtg
gcactcagagtcatcggcttcagcacaccatccatggaggactccatggtgatgatggcc
gtggcccttgtgctctacggcctcatcaagttcatctcttggctcttcctcccctcaggt
ccagctgaggcagtggaaacagaaaagaaaaagaattga
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