Syngnathus scovelli (Gulf pipefish): 125987288
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Entry
125987288 CDS
T08785
Symbol
efna1a
Name
(RefSeq) ephrin-A1a
KO
K05462
ephrin-A
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125987288 (efna1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sscv04052
]
125987288 (efna1a)
00536 Glycosaminoglycan binding proteins [BR:
sscv00536
]
125987288 (efna1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
125987288 (efna1a)
Cytokines and neuropeptides [BR:
sscv04052
]
Cytokines
Growth factors (RTK binding)
125987288 (efna1a)
Glycosaminoglycan binding proteins [BR:
sscv00536
]
Heparan sulfate / Heparin
Axon guidance molecules
125987288 (efna1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
Others
125987288 (efna1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
125987288
NCBI-ProteinID:
XP_049607557
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All DBs
Position
19:complement(5263356..5272925)
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AA seq
227 aa
AA seq
DB search
MDLLWIVYSMLCVFVRLVSSERHSVFWNGTNQKFLWDNYAVEVRLNDYLDIVCPHYPQGE
VPQLDAERYVLYMVEREDYESCKPQSYDQMRWECGHPFAPHGPEKFSEKFQRFTPFTLGK
EFRQGESYYYISKPLHHHGEECLRLRVDVVAADGSQEARVAKGGTAGDAVGGGGGVHNPS
NRLPAADDPVVDLPEVRKSVRTSSAASATSRSVLSLLVPFSLLLLLH
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggatttgctttggattgtctactcgatgctgtgcgtgttcgtccgcttggtttcgtcc
gagcgccacagcgtcttctggaacggcacaaaccaaaagttcttgtgggacaactacgcg
gtggaggttcggctcaacgactacctggacattgtttgcccgcactacccacagggcgaa
gtgccgcagctggacgccgagcgctacgtgctctacatggtggagcgcgaggactacgag
tcgtgcaagccgcaatcgtacgaccagatgcgctgggagtgcggccacccgtttgcaccg
cacgggcccgagaagttctccgagaagttccaacgcttcacgccgttcaccctcgggaag
gagttccgacagggggaaagctactattatatctccaaacctttacaccaccacggagaa
gagtgcctgcggctaagggtggacgtcgtcgctgctgacggctcgcaggaggccagggtg
gccaaaggaggcacggctggggacgccgtgggaggcgggggcggggttcacaacccgtcc
aacagattgcctgcagctgatgacccggtggttgacctcccggaggttcggaagagcgta
cggaccagctcggcggcgtcggcgacgtcacgatccgtcctgtcgttgctcgtcccgttc
tcgttactgcttttgctgcactga
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