Syngnathus scovelli (Gulf pipefish): 125987360
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Entry
125987360 CDS
T08785
Symbol
zbtb22a
Name
(RefSeq) zinc finger and BTB domain-containing protein 43
KO
K10502
zinc finger and BTB domain-containing protein 22
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125987360 (zbtb22a)
04121 Ubiquitin system [BR:
sscv04121
]
125987360 (zbtb22a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
125987360 (zbtb22a)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
125987360 (zbtb22a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
zf-C2H2_6
BTB_KLHL33
C2CH-4th_BIRD-IDD
DUF5810
BTB_BTBDG
zf-met
Motif
Other DBs
NCBI-GeneID:
125987360
NCBI-ProteinID:
XP_049607636
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All DBs
Position
19:complement(3029959..3033531)
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AA seq
657 aa
AA seq
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MDPSSSASTVPAALTVQVYFPSVRAAVLDNLNHQREEGRLCDLSIHVQGKVFQAHRCVLA
ASSPYFHDQVLLKNVTTVSLPSVMDPVAFESVLSSAYTGQLSIVHDDIVNYVTVASFLQM
WHIVDKCTEILKRPRPSVEITVADAVHAGGTSRQQSPSSTDCLYLEREGRRKEAKPDALP
PLATWRRPQQFSRWGSSRPSPAQHLADSQLDALPYAENDYICCEETCDGKSGHFAHGSPS
GEILKQKLRCQPRGTLQSVDRQNEKNTSGEDGETLQRKKNEKRELEADEGIGEEAVEKKE
GFAQMGDLQPMLVENDESRRATVKVSLAAVRDKAQMLSSVPPCHKAESPLGEPCAVVARV
QWQTGPWSHQESRPQEGEMVGKAEEGFQCQTEGKFNSDTYDEIEDGTGQVSQRPLVPASP
DFTMAASEGGWPPTSIAPSGSSLTLPTGRHLPPISANLPPPTSPPTPSSSSSVTMASAPY
SGKVHFCHCGKAFTLKSMRDRHVKMQHLNLRPFGCPVCNKSFKMKHHLTKHLKTHGGLRP
YECGVCGKKVIWRDSFLRHQARCERIASSDNNTGSARPDMDNGYGYAYDGGGGGDAFLSM
GGQVKVEEADFHGEMEDGMSGLLGSVSGIVDELRTQHLDTSGHVYKEEAGESFGETK
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagctccagtgcttctactgttccagcagctttgactgtgcaagtgtatttc
ccttctgtccgtgctgctgttctggacaacctgaatcaccaacgtgaggagggccggctg
tgtgacctctccatccacgtgcaaggcaaagtgtttcaggcccaccgctgtgtgctggct
gcatcctcgccttacttccatgaccaggtgttactgaagaatgtgacaacggtgtccctt
ccgtcagtcatggacccagtcgcgtttgagagcgtgctaagttcggcgtacacaggccag
ctgagcatcgtccacgatgacatcgtcaactacgtcaccgtagctagcttcctccagatg
tggcacatcgtagacaaatgcaccgagatcctaaaaagacctcggccgtcggtagagata
accgtagcggacgcggttcacgccggcggcacatcgagacagcagtcaccgagcagcact
gactgtttgtatctagagagagaggggaggaggaaagaggctaaacctgacgccttgcct
ccgttagctacttggaggcgcccgcagcaattttcaagatgggggagctcacggccctcg
ccagcgcagcacttggccgactcccagctggatgccctcccatacgcagagaacgattac
atctgctgcgaagagacttgcgatggcaaaagtggccatttcgcccacgggagtcccagt
ggagaaatactgaagcagaaactccggtgtcagcctcgaggaactttgcagagtgttgac
agacagaatgaaaagaatactagcggggaggacggtgaaacactgcagaggaagaagaat
gagaaacgagagcttgaggctgatgaaggaattggagaagaggcagtggagaagaaggag
ggatttgcacaaatgggagacttgcagcccatgttagtcgagaatgacgagtcaagacga
gccacggtcaaggtgagtttggcggccgtgcgagataaagcgcagatgttatccagtgtc
ccgccgtgccataaagccgaaagccctttgggagaaccctgtgcagttgtagcccgagtg
cagtggcaaacaggtccctggtctcatcaagagtccagaccacaagagggggagatggtc
ggtaaagctgaggagggatttcaatgtcaaacagagggtaaatttaactcggacacttat
gatgaaatcgaagatgggacgggtcaggtttcccagaggcctctggtgcctgcgtcgccc
gacttcaccatggctgcctcggagggaggctggccccccaccagcatcgcgccgagcggt
tcgtcgttaaccctccccaccggtcgtcatttgccccccatttccgccaatctgccgcca
cccacgtcgcccccaacgccgtcgtcgtcatcctcggtaaccatggcgagcgctccctac
tcgggcaaagtccacttttgccactgcggcaaagcgtttacgctgaagagcatgcgcgac
cgtcacgtgaaaatgcagcacctcaacctgcggccgttcggctgccccgtctgcaacaag
tccttcaagatgaaacatcacctcaccaagcacctgaagacccacggaggactgcggccg
tacgagtgcggcgtgtgcgggaagaaggtcatctggagagacagcttcctgaggcaccag
gccagatgcgagcggatcgcttcgtccgataacaacacgggctcggctcggcccgacatg
gacaacggctacggttacgcatacgacggcggcggcggcggcgatgctttcctgtcaatg
ggaggacaagtgaaagtggaggaggcggatttccacggggaaatggaggatgggatgagt
gggttgctgggaagcgtgtccgggattgtggacgaacttagaactcaacatttggacact
agtggtcatgtttacaaagaggaggcgggagagagctttggggaaacaaagtag
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integrated database retrieval system
