Syngnathus scovelli (Gulf pipefish): 125987383
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Entry
125987383 CDS
T08785
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125987383
Membrane trafficking [BR:
sscv04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
125987383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
125987383
NCBI-ProteinID:
XP_049607674
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All DBs
Position
19:7375374..7390411
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AA seq
1395 aa
AA seq
DB search
MYACVLDLLVLVVGCFHVLVGKRRRQVEERDLPDEKQEMEPSELPKDLLESVQEAVGRGL
ELTLSCQLQPEVKGEKVDKVLALSSHRAYQLSARFPSKVEHSFSYLDIHGLCSNKPTQVL
VECQRGPCTLWFSSQKDSDRVIAHVGACLTRICPDMNLLKKFHVTPSERWAALMAVWEQL
DPAGLGPCGGFSVQYRAVCDNLNLAYREEVQWDVDTIYLSQDTTELNLHDFSHLDGRDLV
AIVGTLEYNKWFTKLVAKDFKLSADVCEQILHVISQSSCLEELVLDNVGLRSDFAHKLSL
ALAHNPASTLHTLNLSNNSLDDKGMCALGAQLGKLAMGLKRVNLSKTSLSPKGVNLLCQA
LCRNPSVAASLTHLQLTGNSLRGDDLQHLHNFLSHDNRLQVLDLSSTDCSLEQTSSSLLK
GCLKHLRVLNMSKTIYSHRKCREVPASFKQFFSLSQALVSVNVSGCRLPAEALKALLLGL
GCNPNLGDVSLDLSGCELRSAGAQILEGCVAEIPNISSLDISDNGLDGDLSTLLVWLAKN
RSVRHLSLGRNFQNMKSKNVAPVLDKLVRLIQEEESPLSSLSLADSKLKGDLVMVLNALG
SNTSLTQLDISGNAMGDMGAKMLAKALQINTKLRTLVWDRNNVSPQGLQEVASALEKNFT
IRFMPVPIVDAAQALKTHPEKTEDALLKMEHFLLRNHETRKYLQEQAYRLQQGIVTSTTQ
QMMDTMCVKVQDHLNSLMFSQDRLVREDMKIAENLMNDARNSKTLLPCLYHLGGDAFRGA
IQDKLESVAVEVAAVMEEQLRTMLASMLEAASGLCPHVMKMNRLSVHLMKAGAEKMSVPR
TFFSQTLLEQTGVDILNKISELKLGAASLISDCVVDGILDSLSTWRHTLANHVSRQLQPE
SQEERQILDETILYPEFREEGGQADACVVRIATFLPHVKAIWLSMSLIEHLCLQTTAKSK
RKSILVRMLRPVSVAFEMEFDLDKALQEVPIHVVEPPPPLPVPDLAPAFPPLGSPPPLQH
HTKLRPKTRRRTKASRVGRETAPVVEHEGMMGRLDEGVDEFFTKKVLKVSLKRLAAQAMP
LNTHELVDKKRESRKSGFFNLIKGQTSRSEKSQGAAASVMSPWTTSPSPVLSAPMTPVNV
LTDESLPTSPSMEHSETTASAPSSGEAEEKDVALLPRRVGVPVMGADLLAEIKARQKKMA
SHKLESSKEGHMDAEQSRPETSPRSKDPIVSTKSPLCPPVTESLSLPSPSSVPSLPSPLS
PSSVPSLPSPSNFPSLPSTLGSGSTFVPNDSVAEGVQVPLPAPRLKREPSQNDEHQDSNL
TDDSVAEGFQVPLPAPRLKREPSQNDGHQDSNLTAWGVAAASPRQQRWSSLKTSPRRCPD
VRQRAKSLPTYSPTP
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcgtgcgttttggacttgctggtacttgtggttgggtgtttccatgttctggtg
ggaaaaagaagaagacaagtggaagaacgtgatctgccggacgagaagcaagaaatggag
ccgtcagaattgccaaaggatttactcgagagtgtgcaggaggcggttgggcggggcctc
gagttgacccttagttgccagctccagccagaggtcaaaggtgaaaaggtggacaaagtg
ctggccttgtcgtcgcatcgagcctaccagctgtcggcacgctttccctccaaggtggag
cactccttcagctacttggacatccatggtctctgtagcaacaagcccactcaggtgcta
gtggagtgccagcgcggcccatgcacgctgtggtttagttcccagaaggacagtgaccgg
gtcatcgcccacgtcggtgcctgtctcacaaggatctgcccagacatgaatctgctgaag
aagtttcatgtgacgccttctgagcgttgggctgctctcatggccgtctgggagcagctg
gaccctgcgggcttggggccttgcggaggcttctcggttcagtaccgggccgtctgcgac
aacctcaacctggcctacagagaggaggtccagtgggatgtggacaccatctacctgagc
caggacaccacagagctcaacctgcacgacttcagtcacctggacggcagggatctcgtg
gccatcgttggcacactggagtacaacaagtggttcaccaagctggtggcgaaggacttc
aaactgtcggcagacgtttgcgagcagatcctgcacgtcatctcccaatctagttgcctg
gaggagctggtcctggacaacgtcggcctcagaagtgactttgctcacaagctgtccttg
gctctggcgcacaaccccgcctccacgctgcacaccctcaacctcagcaacaactctttg
gacgacaaaggtatgtgtgctctgggcgctcagctgggcaaactggcaatgggcctgaag
agagtgaacctcagcaagacctcgctgtcccccaaaggcgtgaacttgctgtgtcaggcg
ctctgccgcaaccccagtgtggccgccagtctcacacatctccagctgacaggaaactca
ctcagaggggacgacctgcagcacctccacaacttcctgagtcatgacaaccgcttacaa
gttttggatttgtcctccactgactgctcattggagcagacatcatcatctcttctcaaa
ggatgtttgaagcatctgcgtgtcctcaacatgtcaaagacaatctactctcacaggaag
tgcagggaggttcccgcatccttcaagcagttcttcagcctgagccaggctctggtctcc
gtcaacgtgtccggatgcagacttcccgctgaggctctgaaggcgctgctgctaggcctg
gggtgcaacccaaacctgggcgacgtgtctctggacctgagcggctgtgagctgcgctcg
gctggcgctcagatcctggagggctgcgtggcagagatccccaacatctccagtctggac
atctccgataacggcctggatggggacctgagcaccctgctagtctggctggccaaaaac
cgctcggtgcgccacctttcattgggcaggaacttccagaacatgaagtccaagaatgtg
gcgccagtcctagacaaactggtccgtttgatccaggaggaggagtcgccgctgagctcg
ctgtcgctggctgactccaagctgaagggcgacctggtcatggtcctcaacgccctggga
agcaacacctccctcacgcagctggacatcagcggcaacgccatgggagacatgggtgcc
aaaatgttggccaaggccctgcagatcaacaccaagctcaggacgctcgtctgggacagg
aacaacgtcagccctcagggcctgcaggaagtggcgtccgctttggagaagaacttcacc
atccggtttatgccggttcccattgtggatgccgcccaggcgcttaagacacacccagaa
aagacagaagacgctctgctgaagatggagcacttcctgctgaggaatcacgaaacccgg
aagtacctccaggagcaggcgtaccggctgcagcagggcatcgtcaccagcaccacgcag
cagatgatggacaccatgtgtgtgaaggttcaggaccacctaaactcactcatgttctcc
caggaccgtttggtccgggaggacatgaagattgcggaaaacctgatgaatgatgcaaga
aactccaaaacgctgctcccttgcctctaccacctgggtggcgatgctttccgcggtgca
attcaagacaagttggagtcagtggcagtggaagtggcggccgtgatggaggagcagctg
cggacgatgctggcgtccatgttggaagcggcctccggtttgtgtccacacgtgatgaag
atgaaccgtctcagtgtacatctaatgaaggcaggcgcggagaagatgagcgtccctcgc
acatttttcagccagacgctgctggaacagacgggcgttgacatcctcaacaagatcagt
gagctgaaactcggcgcggcatccttgatctccgactgcgtggtcgatggaatcctggac
tctttgtccacgtggcgccacacgctggccaatcacgtgagcaggcagctccagcccgag
tctcaggaggaaaggcagattctcgacgagacgatcctatatccggagtttcgcgaggag
ggcggccaagcagacgcttgcgttgtaagaattgctactttcctcccccatgttaaggct
atttggttgtcaatgtctttgatagagcacctttgcctccagacgacagccaaatccaaa
aggaagagtattctcgtccgaatgctgcgaccggtctcggttgcctttgagatggagttt
gacctggacaaggccctgcaggaggttcccatccacgtggtggagccgccgccgcctttg
cccgtgccagaccttgcgccagcgttcccacctctgggatcgccgccccccctgcagcat
cacaccaaattgcggcccaaaaccaggaggcgaaccaaagctagcagagtcggccgggag
acagcgccagtggtcgagcatgagggcatgatgggaaggctggatgagggtgtggacgag
ttcttcaccaagaaagttctaaaagtcagcttgaaacgccttgccgcacaagctatgccg
ttaaacacgcacgagttggtagacaaaaagcgagaatccaggaagagcggctttttcaac
ctcatcaaaggtcagacgtcccgttcggaaaaaagccagggggccgccgcatctgtcatg
tcgccctggaccacgtcaccctccccggtgctgtcggcccccatgactcccgtcaatgtg
ctcacggatgagtcccttcccacgtcgccctccatggagcattctgaaacaaccgcctcg
gcaccttcctctggagaggccgaggaaaaggacgtcgctctgctcccgcggcgcgtgggc
gttcccgtcatgggtgccgaccttctggcagagatcaaagcacggcagaagaaaatggcc
tcccacaagttggagtcgtcgaaagaaggccacatggatgcagagcagtctcgaccagag
acctccccaaggtccaaagaccccatcgtcagcaccaagtcgccgctctgtccgccggtc
acggaatccctcagtctgcccagtccctccagtgtccccagtctgcccagtcctctcagt
ccctccagtgtccccagtctgcccagtccctccaatttccccagtctgcccagtacactg
ggttccggcagcacctttgtgccgaacgattccgtggcagagggtgttcaagttcctctt
cctgctcctcgcctaaagagggagccatcacaaaatgatgaacaccaagatagcaacttg
actgacgattccgtggcagagggatttcaagttcctcttcctgctcctcgcctgaagagg
gagccatcacaaaatgatggacaccaagatagcaacttgactgcatggggcgttgccgcc
gcctcaccgcgacagcagcgttggtcgtccctcaagacgtcaccacgccgttgtcctgat
gtgcgtcagcgagccaagtccctgcccacctactctccgacaccgtaa
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