Syngnathus scovelli (Gulf pipefish): 125987385
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Entry
125987385 CDS
T08785
Symbol
pex1
Name
(RefSeq) peroxisomal ATPase PEX1 isoform X1
KO
K13338
peroxin-1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125987385 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125987385 (pex1)
Membrane trafficking [BR:
sscv04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
125987385 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
nSTAND3
AAA_14
RNA_helicase
NACHT
AAA_33
AAA_25
NPHP3_N
AAA_2
AAA_18
DUF815
ABC_tran
AAA_28
TIP49
AAA_29
AAA_24
Methyltransf_14
AAA_7
RuvB_N
Viral_helicase1
Bac_DnaA
ATPase
FtsK_SpoIIIE
Mg_chelatase
Sigma54_activ_2
APS_kinase
AAA_lid_PRS2_C
AAA_23
DUF87
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
125987385
NCBI-ProteinID:
XP_049607681
LinkDB
All DBs
Position
19:7209557..7215594
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AA seq
1203 aa
AA seq
DB search
MYSGIHPVTVVFINAKNCFLHVPAKLISHLSLNENQALEFFSSHDSPPAFLSWTVSHSSC
GLDDHRVELCRHLAEKLGLQDGQEGFLRACQQVSSVHRVFAEPLSADDWEILELHSGALE
QKLLDQIRVVFPGAVFPVWVDGHTVIYIQIASLSPSVPYGRLETFTELAVTLKEHARRPE
GPPRFHSAPLPTPAAPSQQCGGVTDWESLFGYVTNGASAPLKELPSVPDVPALLADALYR
VCGAPPPSLAAAGHVAPGVLHVFPLSHLSDFHIAEVRPELTYGLLSKVLSPTERANLEKK
KSSEEAKGREATVVRLVCHGSDMQRRRTEGDIHTGRVWIPPALSVRLNILPHSAVRIKPV
KSTVKVATFIQLQPLTALMEAEESEEEAVQTAFLDWLHSQTHPSLACLTPRVGSVLIDAT
DDKLEFAVTVLKPEAESEAPDQLFLLSPSVLQKKHIKVVREPASAPAAQADPPKQDLPSL
GCLGGVDELSRQGFEFISFSLLATPLGRELLGVIGRGLKGGALLITGAQGSGKSTLSRAL
CRKAADELDAHVEVLDCKKLQGKRVESIRQTLRDVFTQAEWKQPSVVLLDDLDHVSRAPT
TPEHEHGPEALLYLHVAQSLLDLVNEMMEEDTLMCLIATSESKCSLHGTLTQVQGTHFFQ
AFVHIQPPDKTQRADILFHAIRTRCGPSQPDSQYVDLAAVAKETEGYLPQDLQLLLERAL
HTNAARQQQNDSFDEPLSRQDFAEAFDDFIPPSRWGADLHCPSGGGLETVGGLTQVQQQL
MDTILLPAKYPVLFSKLPIRHRSGILLYGAPGTGKTLLAHAVVKDSGMNFISIKGPELLS
KYIGGSEQAVRDVFQRAEAAKPCVVFFDEFDSLAPKRGHDSTGVTDRVVNQLLTLLDGAE
GLQGVYVLAATSRPDLIDQALLRPGRLDKSLYCPPPGEEDRLAILKILSAGVPLAPDVDL
EELAAQTHGFTGADLKALLYNAQLEALNAGPETTCDMSLSSMIFPNNSSGSDDLADDGEG
DGYVSLEPADLLVSDKSHHQKGGDAWRLYFGSSFESVEDSHVSEHDSDSPTPECSFSLTP
LAMASLQSGFRELSDEELQRLQREVACIKLNHRRANGERVRTHSSLSQPGFLLRRCHSLA
ALDTTRPSLSKDDWSRYTTLWVAHNLPRDTHNKIYCPLTFAGTRHFREAGLLRKHSNRDN
ASP
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcggcatccacccggtgacggttgtgtttatcaacgctaaaaactgcttcctc
catgtacccgctaagttaatttcccatctgtcactgaacgagaaccaggccttggagttt
ttcagcagccatgacagccctccagccttcctcagctggactgtgagccacagctcctgc
ggcttggacgaccaccgcgtggagctgtgcagacacctggcagagaagctgggcctgcag
gacggacaggaggggttcttgagggcctgtcaacaggtgtcgtcggtacatcgagtgttt
gcggagccactctcggctgacgactgggagatcttagagctccatagtggtgcactggag
cagaagcttttggatcaaattcgagtggtgttcccaggtgctgtttttcccgtatgggta
gatggccacacagtcatttacatccaaatagcatccctgtcgccttcggttccttatggt
cgcctggagaccttcacggaactcgcggtgacgctcaaggagcacgccagacgccctgaa
gggcctccccgcttccactcggcaccactgcccacacctgcagccccctctcagcaatgt
ggcggcgtaacggactgggaaagtctgtttggctacgtgacaaatggcgcgagtgccccg
cttaaagagctcccatcagtaccagacgtccccgccttgcttgccgacgccctctacaga
gtatgcggcgcaccgcctccgtctctggccgccgccggccacgtggcacccggcgtgctt
cacgtcttcccgttgagccatttgtcggatttccacatcgccgaagttcggccggagctg
acgtacgggctgctgtccaaagtgctttcgcccacggagcgagctaacttagagaagaag
aagagctcagaggaggcgaaaggacgagaggccacggttgtgcgcttggtgtgccacggg
agcgatatgcaaagacgacgcacggagggagacatccacaccggtcgagtctggattcct
ccagccttgtctgtcaggctcaacatcctcccacattcagccgtgagaataaagccggtc
aagtccaccgtcaaagtggcgaccttcattcaactccagcctctaacagcattgatggag
gcggaggagtctgaggaggaggccgtccagacggccttccttgattggctgcacagccag
actcacccatctttggcctgcttgacgccacgagtcggctccgtcctcatagacgccacc
gacgacaagttggagtttgctgtcacggtgctaaaaccagaagctgagagcgaagcgccc
gaccagctgtttctgctctcaccttccgtcttacagaagaagcacatcaaggtagtccgg
gaaccagcatccgcacccgctgctcaagcggacccgccaaaacaagatctgccctcttta
ggttgtctcggcggtgtggacgagctcagccgacaaggttttgagttcatctcatttagt
ctgctggcgactccgttgggcagagaactgctgggagtcattggacgaggactcaaaggt
ggagcgctgctcatcaccggcgcgcagggcagcggaaagagcaccctgtcccgcgccctc
tgcagaaaagctgcagatgagctggacgcgcacgtggaagttttggattgcaaaaagtta
caaggcaaaagggtggagagcatccgccagacgctgcgggacgttttcacgcaggcagaa
tggaagcagccctccgtggtcctcctggacgacttggaccacgtgagccgggcgccgacc
acgcctgaacacgagcacggcccagaggcgctgctgtacctgcacgtggcgcaaagcttg
ttggacctcgtcaacgagatgatggaggaggacacgctgatgtgcttgatagcgaccagt
gagagcaaatgctctttacacggcacgctcacgcaagtgcaaggaacacacttcttccag
gccttcgttcacatccaaccgcctgacaagacccagagagcagacatcctctttcatgcc
atccgaacgaggtgcggcccgtcccagccggattctcagtatgtggacctggccgctgtt
gccaaggagacagagggctacctgcctcaagatctccagctgctgttagagcgagccctc
cacactaacgcggcacgtcaacaacaaaatgacagcttcgatgagcctctgtcgcgtcag
gactttgcagaggcatttgatgacttcatcccgccctccaggtggggggcagacctccat
tgtcccagcggaggggggctggagacggtggggggactgacgcaagtgcagcagcagttg
atggacaccattttgcttcccgccaagtatcccgtcctgttctccaagcttcccatccgc
catcgctcaggaatcctgttgtatggcgcgccgggcacaggaaagacgctgctggcccat
gccgtcgtcaaagacagtggcatgaacttcatcagcatcaaaggtccagagcttctgagt
aaatacatcggcggaagcgagcaggcggtgcgagatgttttccaaagggctgaggcggcc
aagccttgcgtggtcttttttgatgagtttgattcgttggcacccaagaggggtcacgac
agcaccggcgtgaccgaccgtgtcgtcaaccagctgctcactctactggatggcgccgag
ggcttgcaaggtgtttacgtgctggccgccaccagtcgtccggacctcatcgaccaggct
ctgctgcgtccaggccgactagacaagtcgctctactgccctccgcccggcgaggaggac
cgcttggccatcctgaagattctgagcgctggtgtccccttggcccccgacgtggacctg
gaggagctggcggcgcagacccacggctttaccggcgccgacctgaaagcgctgctctac
aacgcccagctggaagcgctaaacgccggcccggagactacgtgcgacatgagcctgtct
tccatgatattccccaacaacagcagtggttccgacgatctggcggacgacggcgaggga
gacggctacgtgagcctggagcctgccgaccttctggtgtcggacaaaagtcaccaccaa
aagggcggcgacgcctggaggctctacttcggaagctccttcgagtctgtcgaagacagt
cacgtctccgaacatgactcggacagtccgacccccgagtgcagtttctccctgactccc
ctcgccatggcttccctccagagcggcttccgggagctcagcgacgaggagctgcagcgt
ctccagcgggaggtggcctgcatcaagctcaaccaccgccgagccaacggggagcgtgtg
cgtacacactccagcttaagccagccgggcttcctgctgcgtcgctgccactcgcttgct
gctctggacaccaccaggccgtcgcttagcaaggacgactggagccgatacacgacactg
tgggtagcgcacaacttgccgcgtgatacgcacaacaaaatatattgtcctcttacgttt
gcaggtacgaggcattttcgggaggcaggactgctgcgcaaacattccaaccgggacaac
gcgtcaccttag
DBGET
integrated database retrieval system
