Syngnathus scovelli (Gulf pipefish): 125987391
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Entry
125987391 CDS
T08785
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
AgrD
Motif
Other DBs
NCBI-GeneID:
125987391
NCBI-ProteinID:
XP_049607698
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Position
19:7288262..7297784
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AA seq
951 aa
AA seq
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MALGEGPPLLLLLASCFLHASSFPRDLQAISLLDESGRLPVFSSLLRDDANGRPGLRFQR
MTRVNRMLFITARDHVFAVNLTTAAEAFVPQTTLTWHAADVSKCAVRGKDGDECYNYIKV
LVPRDDETLFVCGTNAFNPACRNYKTSTLEQVGSDLPGQARCPFESSQSNAGTFAGGDFY
SATVTDFLASDAVIYRSLGDGRPVLRTVKYDSKWLREPRFLHAVDYGSHVYFFLSEIAAE
YTTLGKVVFSRVARVCKNDNGGSPRVLDKHWTSFLKARLNCSLPGDSLFYFDVLQSLTSI
LQINGRPAVLAVFTTQANSIPGSAVCAFYMDEVEKVFGGKFKEQRGSDSAWMAVADDAVP
EPRPGSCAGDGPAANFKSSADFPDETLAFIKSFPLMDGAVPAVNRRPLYTRTASRFKLTQ
IVADVSAGPHKERTVVFLGSEDGRVAKVLAATLPHDTFGSKLLEDIDVYDPDKCDPGVLE
GDRRILGLELDKEHHALFVAFSSCLVRVPLSRCRRHGACKRACLASQDPYCIWLRTGRCA
DMAPGFKAGFEQDIEGDHSNMAPCQAVISAASGNRETPSDSAYGVLGAAAVDEDSASGVH
YTLLIACALLAFLLGAASSGLLASRFCGGAHQKGKLDKDLEASLPHALSLHSLAKLSGLL
DTTVPKEDKTVESQYPETCGSFIPEGRASDALTACHRLAAAEPQVGLTQAASDLLALPTA
NSGPERPWRKTSSEFPVPDGPASSADSLASFAAVTTADCVSPCVFPPPHLRGNGQPSSDA
SDVSALDELLRHIQQVSAQGDGGIRVLTSTSRGHPHHHLHQCGLDRSRHCGNRQPATQAL
PLNANGAILRQHAMIPEAPVQPGGLALVEMGGGLPRHHSSNQRGAPPRQHLLARMNTSSS
GPPAPRACLTRQHSYSEGVCVQRGNASAVRRAVSLKPKVPPKPLFLPDARN
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggccctgggcgaggggccaccgttgctgctcctgctcgcttcctgcttcctgcatgcc
tcgtccttcccacgagacctgcaagccatcagcctgctggacgagtcgggacgcttgccg
gtattctcaagtctgctgcgggatgacgccaatggccggccgggtctccgcttccagagg
atgacgcgcgtcaaccgcatgctcttcatcactgccagggatcacgtgtttgccgtaaac
ctgacgacggcagccgaggccttcgtacctcagacgacgctgacgtggcacgccgccgac
gtgagcaagtgtgccgtgcgggggaaagacggcgacgagtgttacaactacatcaaagtg
ttggtgccgcgcgacgacgagacgctgtttgtgtgcgggaccaatgccttcaacccggcg
tgccgcaactacaagacgagcacgttggaacaggtgggctcggacctgccgggtcaggcg
cggtgtcccttcgagtcaagccagtccaacgctgggacattcgccggtggagatttctac
tcggccaccgtgaccgacttcctggccagcgatgccgtcatctaccgcagcctgggagac
ggccgacccgtcctcagaaccgtcaagtacgactccaagtggcttcgagagcctcgtttc
cttcacgccgtggactacgggagccacgtctactttttcctgagcgagatcgcggcggag
tacaccaccttggggaaggttgtcttttctcgggtggccagagtctgcaagaatgacaac
ggcggctcgccgagagtcctggacaagcactggacctccttccttaaggctcgcctgaac
tgttctcttcccggagattctctcttctactttgacgtgctccaatcgctgaccagcatt
ctgcagatcaatggacgtcccgccgtgttggctgtcttcaccacgcaggctaacagcatt
ccgggttcggcggtgtgcgcgttctacatggacgaggtggagaaagtgtttggaggcaag
ttcaaggagcaacgcggcagcgactcggcgtggatggccgtggcggacgacgctgtgccc
gagccgcggcccgggtcgtgcgcgggcgacgggccggccgccaacttcaaatcttctgcg
gatttcccggacgagacgctggcgttcatcaaatcttttccactgatggacggtgccgtg
cctgctgtcaaccggcggccactttacaccaggaccgccagcaggttcaagctgacgcag
atcgtggctgatgtttcggcgggtccccacaaggagcgcacggtggtgttcttgggctca
gaggacggccgagtggctaaggttctggctgccacgcttccccacgacacctttggctcc
aaactcctggaggacattgacgtatacgaccccgacaagtgtgaccctggtgtcctggag
ggggaccgcaggattttgggcctggagctggacaaggagcaccacgccttgtttgtggcg
ttcagcagctgtctggtgcgcgtgccgctcagccgatgccgacggcacggtgcctgtaaa
agggcgtgtctggcctcgcaggacccctactgcatctggctgcggacaggaaggtgtgct
gacatggcacccgggttcaaggcgggatttgagcaggacatcgagggggaccactccaat
atggccccgtgtcaagcagtcatctcggcggcctctggtaaccgggaaacaccctccgac
tcggcttacggcgtgcttggtgccgcagccgtggatgaagactcggcgtctggcgtccac
tacactctgctgatcgcctgtgcgctgctggcgttcttgctgggcgccgcctcgtcgggc
cttctggcgtcgcgcttctgcggcggcgcccatcagaaggggaagttggacaaagacctg
gaggcctcgctgccccacgccttgtcgctgcactcgcttgccaagctgagcggacttctg
gacaccaccgtgcccaaggaggacaaaacggtcgagtcgcagtaccccgagacgtgtgga
tccttcatccccgagggccgagcgtctgatgccctgaccgcgtgccaccggcttgctgcg
gccgagccccaagttggcctgacgcaggcggccagcgacctgttggctcttcccacggcc
aactcgggcccggaacgcccttggcggaagacgagctcagaattccctgtgccggatggc
cccgcctcctctgcggacagcctcgcctcctttgcagcggtgacgactgctgactgcgta
tctccgtgtgtgtttccgccccctcatctccgtggcaacggccaaccgtcctctgacgca
tcggacgtgtctgcgttggatgagcttctgaggcacatccagcaggtcagcgcccagggt
gacgggggcatcagggtcctgacgtccacctctcgagggcatcctcaccatcatcttcat
cagtgtggcttggaccgcagccgtcactgtggcaaccggcagccggcaactcaagcgctg
ccgctgaatgctaacggcgctatcttgcgccaacacgccatgatcccggaggctccggtc
cagcccggaggtctcgcccttgttgagatgggcggcggcctaccgcgccatcacagttcc
aaccagcggggggcaccgccacggcaacatttgctggccagaatgaacaccagcagcagc
ggccccccggccccgcgggcctgcctgacgcgtcagcacagttacagcgagggagtctgc
gtgcagcgtggtaacgctagtgccgtgcgccgtgctgtctctctcaagcccaaagtgccg
cccaaacctttgttccttcccgacgcccgcaattag
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