Syngnathus scovelli (Gulf pipefish): 125987398
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Entry
125987398 CDS
T08785
Name
(RefSeq) zinc fingers and homeoboxes protein 1
KO
K24879
zinc fingers and homeoboxes protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125987398
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
125987398
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
zf_C2H2_ZHX
Homez
zf-C2H2_7th_ZNF462
zf-C2H2_ZNF462_11
Motif
Other DBs
NCBI-GeneID:
125987398
NCBI-ProteinID:
XP_049607720
LinkDB
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Position
19:complement(7474006..7479866)
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AA seq
842 aa
AA seq
DB search
MASRRKSSTPCMLPPHSDGDDADRCVNDSVSEPSSGGYDCKDYKTLQLFAEHVDSEHPDL
VADTSYICVECHYHARSYNALATHYAHHHPGQDQFTDTAATHGDEPASGPHSPEREEDVW
RDDDVGPHDGWDEDARRKGIALSKTPIMRSRAEPKKFTASHKMATEHIIKVESDDEMDKY
NYSPTLSPGPMAPVTAAPSLLPVFAPLQIQAGPPPQNLVVNGPSVLHVNGGTLPAGTLAQ
VLTALQNQRQLLIPISSIPSYNVAMDNNVLLLGTYNRFPYPSSSEIAALASQTKFGEENV
KVWFSAQRLKHGVSWTPEEVEEARRNKSNGTVQTLHQSLPQTITVIPANMAANIFQTCQI
VGQPGLVLAQVGSGDGAKLPAAAPLTLTVAPATQPKSAEATAAEPPAEKASAILDSAFKP
KKSKEQLAELKASYGRRRFATDAEISRLMRVTGLSKRAIKKWFSDTRYNQRNSRDLRHDS
VAGWVGAYTDKGADKGADKGSDKGADADKGADADKGAAAIVIDSSDDTGDYPPTADQGSP
RASRDRRTKLRHAFPDFTPQKFKEKTSGQLLILESSFHKCDTPSDDELTRLRAQTKLTRR
EVDAWFSDRRKGGKGEAGETGKEAGEAKETMPPAGRRVLKKTPAQLDILKKAFVRSRWPT
AQEYDKMAQDCGLPRNYVVNWFGDTRYAAKNSNLKWFDHYHAGKVDEASPDGTARTPRKS
RKRFRGWSRRTRRPYAGKQDAQMPGKGKSSKAFLRAYFLQRPVVSEEHLDDLAAKSDMSE
QQIRQWFSEVGRRAAEGKDPFDDRQQQGQEARERAAGEGDHRRREDVIQEESPGANQSEC
QT
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccgtaggaaatccagcacgccatgtatgctgccgccgcactcagacggggac
gatgcggaccggtgcgtgaacgacagcgtctcggagccgtcgtcgggaggctatgactgc
aaagactacaaaacgctccaattgtttgctgagcacgttgactccgagcaccccgacttg
gtcgctgacacgtcgtacatctgcgtagagtgccactatcacgccaggagctacaacgca
ctcgcaactcactatgcgcaccatcacccaggccaggaccagttcacagacacggcagcc
acgcacggcgacgaaccggcctcggggcctcactcgccggagagggaggaagacgtgtgg
cgtgacgacgacgtcggccctcatgacgggtgggatgaagacgcccgtcgtaaagggatt
gccctcagcaagacacccatcatgaggagccgagctgagcccaagaagtttaccgcctcg
cacaaaatggccaccgaacacatcatcaaggtggagagcgacgatgagatggacaagtac
aactattcgcccactctgtcgcccggccccatggcccccgtgaccgctgcgccctcgctg
cttcctgtatttgcaccactgcaaatccaggcggggccaccgccacagaatttggtggtc
aacggccccagcgtgctccacgtcaatggcggcaccctgcccgctgggaccctggctcag
gtcctaaccgcgttgcaaaatcagaggcagctccttattcccatcagcagtatcccgtcc
tacaacgtggccatggacaacaatgtcctcctgctgggcacctacaacaggtttccctac
ccgtcgtcgtcagagattgcggcgctggcatcgcagaccaagtttggcgaggagaacgtc
aaagtatggttctccgcccagaggctgaaacatggcgtcagctggaccccggaagaggtg
gaggaagcgcgccggaacaagtccaacggcaccgtccagacgctccatcaaagcctccca
caaaccatcacggtcatccccgccaacatggccgccaacatcttccagacgtgtcagatc
gtgggccagccgggcctggtcctggcacaggtgggcagcggcgatggtgccaaactccct
gcagcggccccgcttacgctcaccgttgctcccgccacccaacccaaaagtgcagaagcc
accgctgccgagccccctgcggaaaaggcatccgccattttagactctgccttcaaaccc
aaaaagtccaaagagcagctagcagaactgaaggccagctacggacggcggcgcttcgct
accgacgcagagatttcccgcctgatgcgggtcactgggctgtccaagcgcgccatcaag
aagtggttcagcgacacgcgatacaaccagaggaactccagggacctgcgccacgacagc
gtggcgggctgggtcggcgcctacactgacaaaggcgccgacaaaggtgctgacaaaggc
tccgacaaaggcgctgacgccgacaaaggcgccgacgccgacaaaggcgccgccgccatc
gtcatagactccagcgacgacacgggcgactacccgccaacagctgaccagggctcgccc
cgcgcctccagggaccgccgcaccaaactacgccacgccttcccggacttcacaccacag
aagtttaaggaaaagacgtcaggtcagctccttatcctggagtccagcttccacaaatgt
gacacgccgtccgacgacgagctcacgcgcttgcgggcacagaccaaactgacacgtcgc
gaggtggatgcctggttcagcgacaggcgcaaggggggcaagggggaagccggagaaacc
ggaaaagaagctggtgaagccaaagaaactatgccccccgctggccggagagttctgaag
aaaactccggcgcagctggacattctgaagaaagcttttgtgcgctcgcgttggcccaca
gcacaagagtatgacaagatggcgcaggactgtggcctgcctcgtaactacgtggtcaac
tggttcggggacacacgctacgctgccaagaacagcaacctcaagtggtttgaccactac
cacgccggcaaggtggacgaggcctcgccggatggaaccgcaaggacgccgaggaagtcc
aggaagcgtttccgaggttggtccaggaggacgcgacggccatacgctggaaaacaggac
gcacagatgcccggcaagggcaaaagcagcaaggccttcctaagagcctacttcctccag
cggccagttgtgagcgaggagcacctggacgatttggcggccaagtcggacatgagcgag
caacaaatccgccagtggttctctgaggttggacgtcgggcggcggaggggaaggacccc
ttcgacgatcgccaacagcaagggcaggaagcccgagagcgagcggccggtgaaggtgac
caccggcggcgggaagacgtgatccaggaagagtctcctggcgcaaaccaatccgagtgt
caaacgtga
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