Syngnathus scovelli (Gulf pipefish): 125987405
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Entry
125987405 CDS
T08785
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125987405 (vps52)
Membrane trafficking [BR:
sscv04131
]
Protein recycling
Others
EARP complex
125987405 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
125987405 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
DUF1664
SHE3
COG6_N
Motif
Other DBs
NCBI-GeneID:
125987405
NCBI-ProteinID:
XP_049607733
LinkDB
All DBs
Position
19:7364200..7374890
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AA seq
719 aa
AA seq
DB search
MAEAPADVNPTERTTQSHAALAFFHDEVSDGEMAQLHPGELDLTTEDLILDEVDLHIQAN
LEDELVKEALGTGVDLRQYSKQVEAELERIEQASIKDYIKESQNIALLHHQIGACDAILE
RMEEMLSGFQSDLSSISGEIHTLQQQSLSMNVRLKNRQAVRGQLSQLVDELLVPGAMISA
ILDTPVTEQDFVEQLHELNGKINLAKELSFRETLACSDVQDIVDRLKVKAVWKIREFILQ
KIYSFRKPMTNYQIPQNTLLKYRFFYQFLLANERTVAKEVRDDYVDTMSKIYFSYFKSYS
SRLLKVQYEEVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTLGQRGAILSPPELEGPIL
VPHTAQRSESRYPYETLFRSQHYALLDNGCREFLFLCDFFMVAGNSALDLFNSIMGKTLS
VFLKSMSTYVSDCYDGIAVFLCIHIILRFRAIAAKRNIPALDKYWEAVLELLWPRFELIL
EMNIHSIRNTDPQKLGLLDTRPHYITRRYAEFSSAVVGINQTFPNERTDALLAQLQAEVE
NFVLKMAAEFPSRREQLIFLINNYDMMLGVLTERAADDSKEVEGFQQLLLARTQEFIEEI
LSAPFGGMISFVKEAEALMEKGQLERLKSDEAHICQLVRGFSASWKQSVEAMSQDVMRSF
TNFKNGTGIIQGALTQLIQYYHGFHKILNQPAFRGLPARSELINLHHLMVEVKKHKPNF
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctcctgcagatgtaaaccccacggagaggacgacacagtcacatgcggcc
ttggccttctttcacgacgaggtgagtgacggggaaatggcccagctgcacccgggtgaa
ctggacctgaccactgaggacttgatcttggacgaagtggaccttcatatccaggccaat
ctagaggacgagcttgtcaaagaagcgctcggaacgggtgtggatcttcggcaatactcc
aaacaagtggaggcggaactggagcggatcgagcaagcctccatcaaagactacatcaag
gagagccagaacatcgctttgctgcaccatcagatcggcgcatgtgatgccattttggag
cggatggaagagatgctgagcggcttccaaagcgacctgtcgtccatcagtggtgagatc
cacacgctgcagcagcagtcgctcagcatgaatgtgcgtctgaagaaccgccaggcggtg
cgtggccaactcagccagctggtggacgagctgctggtgcccggagccatgatctccgcc
atcctggacactccagtgacagagcaggattttgtggagcagctgcacgagctcaacggc
aagatcaacttggccaaggagctcagctttcgagagacgctggcttgctccgacgtccag
gacatcgtggaccgcctcaaggtcaaggctgtgtggaagattcgagagttcatcctccag
aagatctactccttcaggaagcccatgaccaactatcagatcccacagaacacactgctc
aagtacagatttttctaccagttcctcctggccaatgagaggacggtggccaaggaggtg
cgagacgattacgtggacaccatgagtaagatctatttcagctacttcaagtcgtacagc
agccgtctgctcaaggtgcagtatgaggaagttgctgacaaggacgatttgatgggagtt
gaagacaccgccaaaaaaggtttcttctccaaaccgtctctgaagagcaggaacaccatc
ttcactctgggccagagaggcgccatcctgagtccccccgagctggagggtcccattttg
gttcctcacacggcgcagaggagcgaaagccggtatccatatgagacactgttccgcagc
caacactatgccctgctggataacggctgcagggagttcctcttcctgtgtgacttcttc
atggtggcgggaaactccgccctggacctctttaatagcatcatgggaaagacgctcagc
gtgttcctgaagagcatgtcgacgtacgtgtctgactgctacgacggcatcgccgtcttc
ctgtgcatccacatcatcttgcgtttccgagccatcgccgccaaaaggaacatcccggcc
ctagacaagtactgggaggcggtgctggagctgctgtggccgcgctttgagctcatcctg
gagatgaacatccacagcatcagaaacaccgacccacagaagctggggctgctcgacact
cggccgcactacatcacacgccgctacgctgagttctcttcggccgtggtcggcatcaac
cagaccttccccaatgagaggacggacgctctgctggcccagctgcaggcagaggtggag
aactttgtgctgaagatggcagcagagttcccctccaggagggagcaactcatcttcctc
atcaacaactacgacatgatgcttggcgtgctcacggagcgggcggcagacgacagcaag
gaggtggaaggcttccagcaactccttctagccaggacgcaggagtttatcgaggagatc
ctgtcggcacctttcggggggatgatctcctttgtgaaggaagccgaggccctgatggag
aaagggcaactggagcgcctcaagagcgatgaagctcacatctgccagctggtgcgaggc
ttctcggcctcgtggaagcagtccgtggaggccatgagccaggacgtcatgaggtctttc
accaactttaagaacgggaccggcatcattcagggcgccctcacccagctgatccaatac
taccacggcttccacaagatcctcaaccagcccgccttccgcggcctgccggcccgatct
gaactcatcaacctgcaccacctaatggtagaagtcaagaagcacaagcccaacttctga
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