Syngnathus scovelli (Gulf pipefish): 125987406
Help
Entry
125987406 CDS
T08785
Name
(RefSeq) neuronal pentraxin-1 isoform X1
KO
K25709
neuronal pentraxin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
125987406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pentaxin
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
125987406
NCBI-ProteinID:
XP_049607735
LinkDB
All DBs
Position
19:complement(6797153..6802578)
Genome browser
AA seq
700 aa
AA seq
DB search
MVLFPAKMKHRGTSRAAVKESFGAKSDIARDIAHPGLETAGTSVVILALRSLVVCYFLSR
SEASASSLGPEHDYSAAPKFVCIPIPPDADPSCYSPPSAPHGPGASHGPSVSHGPGANSH
NGRVLISDEAKATILHLRESLVRQKETILDQRETIRELTAKLTLCEGFGGHHTNGHRNKH
HDNHHVNHHDDHQETHHVNHHDNHHVNHHDDHHDDHHDNHHDNHHDGHQGSHHDNHPDGH
ASHHGFYHGSDHRFSHGSHGSEPHHWDSRGKHDSFSPEQTGKTLQTLKERLENLQARNSS
SSYSSSLRELLQRKINALEEQLRSYYRDHHDDHHDDHHDDHHDDHRDNHHDDHHEDLNHD
NHHADHHDDRHGNGRHDDHHSGHHGSRHYDHHGEHHTRHHDSHYDWHGDRRHSVRYANHH
GDHHGNHHGDHHGDHHGDHHDDHHGDYHHVPRRLPFSSKETSARHGEHSKLESVLSQLHH
GHSEHGGHKKLKSAGAFLLDFPMRTNYLYARMKHSPASELFALSVCLRLKAGTGAGPGVG
TPFSYAVPGQANELVLIEWGADPMELLLNDQAVTLPITVADGKWHHVCVTWATRDGVWEV
YQDGTRKGSGQNLAAWHAVKPGGIFLLGQEQDTMGGRFDVTQSFAGQLSDVHVWSRVLTP
SEIYAQASCGGHLLGDVASWEQEGLELHGGLAELPFEPCH
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgtttcccgcaaagatgaagcatcgcgggacctcgagggcagcggtcaaggag
tcatttggagcaaaatccgacatagccagagacatcgctcatccgggcttggagaccgcc
ggcacgtccgtcgtcatcctcgctttgcgctcactagtcgtctgctacttcctgtcccgc
tctgaagcttcggcgagctcgctcggcccggagcatgactacagcgccgcccccaaattt
gtttgcattcccattcctccggacgcagaccccagctgctactccccacccagcgccccc
cacgggcccggcgcctcccacgggcccagcgtctcccacgggcccggcgccaacagccac
aacggcagagttctgatctcagatgaagccaaagccaccatcctccacctccgcgagagt
ctggtcaggcagaaggagaccatcctcgatcagcgcgagaccatcagagagcttacggca
aagctcaccttgtgcgagggctttggtggccaccacaccaatggccaccgcaacaaacat
cacgacaatcaccacgtcaaccatcacgatgaccaccaggaaactcaccacgtcaaccat
cacgacaatcaccatgtcaaccatcacgatgaccatcacgatgaccatcacgacaatcac
cacgacaaccatcacgatggccatcaaggaagtcaccacgacaaccatcctgatggccac
gcttcgcaccacggcttttatcatggcagcgatcatcgcttctcccatggaagccacggc
tcggagccccatcactgggattcgcgtggcaaacacgactccttctcgccggagcagacc
ggcaagaccctccagacgctgaaggagcgtctggagaacctgcaggcgagaaattcatcc
agctcctactccagctccttgagagaactcctccagcgcaagatcaacgctctggaggag
cagctgcgcagctactacagggaccaccacgacgaccaccacgatgaccaccacgacgac
caccacgacgaccaccgcgacaaccaccatgatgaccaccatgaggacctcaaccacgat
aaccaccacgccgatcatcacgatgaccgccacggaaacggtcgccacgatgaccaccat
agcggtcaccatgggagccgccactacgaccaccacggcgaacaccacactcgccatcat
gactctcactacgactggcacggcgataggcgccattccgttcgctacgctaaccaccac
ggcgaccaccacggcaaccaccacggcgatcaccacggcgatcaccacggcgatcaccac
gacgaccaccacggcgactaccatcacgttcctcgacgacttccttttagcagcaaagag
acaagcgcacgtcatggtgaacacagcaaactggaatccgtcctcagccagttgcaccac
ggccactcggagcacggaggccacaagaagctcaagagcgccggtgccttcctgctggac
tttcccatgaggaccaactacctgtacgccaggatgaagcactcgccagcgagcgagctc
tttgccctaagcgtttgcctgcgcctgaaggcgggcaccggcgccgggcccggggtgggc
acgcccttctcctatgccgtgccgggccaggccaacgagctggtgctaatcgagtggggt
gccgatcccatggagctgctgctcaacgaccaggcggtgactctgcccatcacggtggct
gacggcaaatggcaccacgtgtgcgtgacgtgggccacgcgggacggcgtctgggaggtg
taccaggatgggaccaggaaaggatcgggtcagaacctggcagcctggcacgctgtcaaa
ccaggagggatatttcttcttggacaagagcaggacaccatgggcggccgctttgacgtg
acgcagtcattcgccggccaactgtccgacgtgcacgtgtggtcgcgtgtgctgactccg
tccgagatctacgcgcaggcgtcgtgcgggggccacctactgggcgatgtggcgtcgtgg
gagcaggagggcctggagctccacggtggcctggccgagttgccctttgagccctgccac
tga
DBGET
integrated database retrieval system
