Syngnathus scovelli (Gulf pipefish): 125987416
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Entry
125987416 CDS
T08785
Name
(RefSeq) ataxin-1
KO
K23616
ataxin-1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125987416
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
125987416
NCBI-ProteinID:
XP_049607754
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Position
19:6698477..6709341
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AA seq
593 aa
AA seq
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MKSNLERSNECLPPKKREIPPSTHGPQSRSLVAPPAAKPPENATWPAASSTAQSDAPRYQ
SPPSTSSSTRLSAVCTSPLPQTGGGTLHYTQLPANLQFITSPYNAAYASYVAPQLLPPPS
SYCQRLLSLPEMQERASVRYAAAMPPPPTLYADVAGAGKEDSRELHNGGLERSRGVKLHD
AYEARRAVPLPDSIHEPSRTSVVLEDRQLSLSRGDPGKPLKLTPVSSNHTFPPPSCGDNL
KACVSPLSPQTLVQTARDSPAEPPCVGLTPGGIYPQSPVIGYIAGAGSSQHAAVSYHGSL
QQHVLLPGARPVIIPLDGSALSSARASGGDHPAGSYHRGSSSGPVRAQLHFPTVPSAVAA
PPSLPAYFVKGSIIQLADGELKRVEELKTEDFIQSAEISSELKIDSSTVERIDGSHASPN
FAIVHFSVGERRSQVSVEVLAEYPFFVFGQGWSSCCPDRTSRLLELPCTKLAVGDVCISL
TLKNLSNGSLSKTQPPEPVAPRSAHGFLLEAPKALSRVSVHRERENGAIAVQNGDMDLVV
MPSKLSGTSGRKRRWSAPEARKVEKAEDLPSAKLTFIPHEVKVTIEGRSNLGK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaatcttgaaaggagtaacgaatgtctgcccccaaagaagagggagatccca
cccagcacgcatggtccacaaagccgctccctagtcgctccacctgccgccaagcccccg
gagaacgcgacctggccggctgccagcagcaccgcccagtcggacgcccctcgctatcaa
tcccccccctccacctccagctcgacgaggctttccgccgtctgcacgtcgcccctgccc
cagacaggaggggggacgctccactacacccaactgccggccaatcttcagttcatcacc
tcgccttacaacgcagcgtacgccagctacgtggcccctcagctccttccgccgccctcg
tcctattgtcagaggttgttgtcactccccgagatgcaagagcgagcatccgtccggtac
gccgccgccatgcctccgcctcccacgctttacgcggatgtagcgggcgccggaaaagag
gactccagagagcttcacaacggggggctggagcggagccgcggggtcaaattgcacgac
gcctacgaggcccgccgagcggttcccttgccggactcaattcacgagccttcgagaacg
tccgttgtgctggaggatcgccagctgtcattatcccgaggcgaccctgggaagccactc
aagcttacgcctgtgtcctccaaccacacatttccacctccctcatgtggagacaatctg
aaagcttgcgtcagcccgttgtcaccgcagacactggtccagaccgctcgtgactctcca
gccgaaccaccgtgtgtggggctcacccccggcgggatctacccgcagtcccccgtgatt
ggttacatcgccggggcgggcagcagccagcacgcggccgtcagctaccacggcagcttg
cagcagcacgtgctccttccaggagcccggccggtcatcatcccgcttgacggaagcgcg
ctgtcctccgcccgggcctccggaggtgaccaccctgctggctcataccaccggggcagc
tcaagcgggccggtccgggcccagctccacttccccacggttccgtcggcggtggcggct
cctccgtctctaccggcgtatttcgtgaagggatccatcatccagttagcggacggcgaa
ctgaagcgcgtggaggagctgaagacggaggacttcatccagagcgccgagatcagcagc
gagctgaagatcgactcgtccacggtggagcgcatcgacgggagccacgcctcgcctaac
tttgccatcgtgcacttctctgtgggcgagcgacgctcccaggtgagcgtggaggtgttg
gctgagtatcccttcttcgtcttcggccaagggtggtcgtcgtgctgcccggaccgaacc
agccgactcctggagctaccttgcaccaagcttgcagtgggcgatgtttgtatttcgctc
accctcaagaacctgagcaacggatccctgagcaagactcagccaccggagccggtcgcc
cctcgctcagcccacgggttcctcctggaagcccccaaagcgctttcccgggtctctgtg
cacagggagcgggagaatggtgccattgctgtgcaaaacggcgatatggacttggtggtg
atgcctagcaagctgagcggcaccagtggcaggaagcgccgatggtcggcccccgaggct
cgcaaagtggaaaaagccgaggatctgccctcggccaaattgacttttatccctcatgag
gtcaaagtcaccatcgagggaagatccaatcttggcaagtga
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