Syngnathus scovelli (Gulf pipefish): 125987429
Help
Entry
125987429 CDS
T08785
Name
(RefSeq) transforming growth factor beta activator LRRC33-like
KO
K26316
transforming growth factor beta activator LRRC32
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125987429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_6
LRR_5
LRR_LRWD1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
125987429
NCBI-ProteinID:
XP_049607782
LinkDB
All DBs
Position
1:6985821..6989665
Genome browser
AA seq
656 aa
AA seq
DB search
MVRHMFGYFLLLWSLGHELYSTGKIDNGTKEQSWRNQNLDSVPLDLDVRLRRLDLSNNFI
RRLHNLDLPYLEQLDLSSNQLELISEGASIKNLALLEKLDLSKNALNNNFDRNSKGLQST
GGLKSLDLSLNNLGDEAVKLYLRNKSSLEQLKLSGNSLTRLTRDLFKESEGLRSIIIDDN
LISAIDRGTFEPLGKLGKLNLAKNNLAHICDFKLQHVKDLNLSRNSIEFFVTAEDNRIYS
LEILDLSHNKLLYFPIVPKFNQLKYLYLHHNTVGALTSEASMVSEVNSLYNEVVRKGDVR
IRKNNLHSTWRLMPLIYIDLSYNHFASFPLETLSLLRSLEELDFSFNCVQNLTWNVRRDG
ASEYDRQLYFPSLKYLNMQSNGLVFVSPLFLKALTQVEMINLQDNAVQPCAPEGRVYGSL
SARQPKFNSSCVAFGKLKTLKHLSLEDNNIKSLQANAFQGSSLVSLNLARNSHMVMQVDS
LEDIKETLQSLTISELNATNSELVLPCMPRLMHLNISNNNLNVLPQSLNCSPLRELNIRN
NAFESLNYSLIETLSKHLGVINFSGNYFTCCDSNWLSALNNSRIKMPDITHTKCFTGDSG
ISIEEYLKSSSLYCSLHVNGIHYGQIFTVILFVAVLIIVFIMFTRKMCCLKKSFIV
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggtcagacacatgtttggttatttcctactactatggtcactaggccatgagctttac
agcactgggaaaatagataatggtaccaaggagcaatcttggagaaaccagaaccttgat
tccgtccctctggatttggatgtacgactgagaaggctcgacttatccaataatttcatt
agacggttgcacaaccttgatttgccatacttggagcagctggacttgagcagcaaccaa
ctggagctcatctctgaaggagctagtatcaaaaacctggctctgcttgagaagttagat
ttgtctaaaaatgcgctgaacaacaattttgacagaaacagcaaaggcctgcaatccacc
ggtggacttaagagtttggacttatcactgaacaatttgggggacgaagcggtgaaactg
tacctacgaaacaaatcttctcttgagcaacttaagctgagtgggaattctttaacacga
cttacacgcgacttgttcaaagagagtgaaggcctaagaagcattattattgatgacaat
ctgatatcggcaatcgacagaggaacatttgagccgctgggaaaacttgggaagcttaac
ctggctaaaaataacctcgctcatatatgcgatttcaaactacagcatgttaaagattta
aatctcagtcgaaattccatcgagttctttgttaccgctgaagataatcgcatatatagt
cttgaaattcttgatcttagtcacaacaaactcctttatttcccaatcgtcccaaaattc
aaccaattgaaatacctttatttgcatcataatacagtgggtgcattaacttcggaagca
tcaatggtatcagaggttaattccttgtacaatgaagttgtcagaaagggtgacgttaga
attcgaaaaaataatcttcactcaacctggagactgatgccactgatctatattgacctc
agctacaaccactttgcatcttttccgctggaaactttgagccttctcaggtcattggaa
gaacttgacttcagttttaactgcgtgcaaaatctcacatggaacgtccgccgtgacggt
gcatcagaatacgacaggcagctttattttccttccttaaagtacctaaacatgcaaagc
aatggacttgtgtttgtttcgccactctttctcaaggcactcacacaagtcgagatgata
aatctccaagacaatgcggtgcagccttgcgctcctgagggccgagtatacggctcctta
tcagcacggcaaccaaaattcaactcatcttgtgttgcctttggaaaattgaaaactctc
aaacatctgagccttgaagacaacaacataaaaagtcttcaggcaaatgcattccaggga
agttctttggtgtccctcaacctagctcgaaattctcacatggtcatgcaagttgattca
ctggaggacatcaaagaaacgcttcagtcgttgacgatcagtgaattgaacgcaaccaat
tccgagctggtcttgccctgcatgccaaggctgatgcatctcaacatatccaacaacaat
ctcaatgttttaccacaaagtttaaattgctcacctctaagagaactcaacattaggaat
aacgcctttgagtctttgaactactccttgattgaaacgttatcaaaacaccttggtgtt
atcaatttcagtggaaattactttacttgttgtgacagcaattggctgagcgccctgaac
aattccagaattaaaatgcctgacattactcacaccaaatgctttaccggtgacagcggt
atctctatcgaagaatatttgaaaagttcttcactgtattgttcacttcacgtaaacggg
attcactatggacaaatattcacagttattttgtttgtagctgtattgataatagtgttc
attatgttcactcgaaaaatgtgttgccttaaaaaatcattcattgtgtga
DBGET
integrated database retrieval system
